CN185844

Overview
NameCN185844
Unique NameCN185844
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASN_MOUSE (GTPase NRas OS=Mus musculus GN=Nras PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF ++  +  +I R   S++V  +LVGNKCDL   + V  + A   A   GIPF+ETSAK+   VE AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDL-PTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIR 164          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASN_MONDO (GTPase NRas OS=Monodelphis domestica GN=NRAS PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF ++  +  +I R   S++V  +LVGNKCDL   + V  + A   A   GIPF+ETSAK+   VE AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDL-PTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIR 164          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASN_HUMAN (GTPase NRas OS=Homo sapiens GN=NRAS PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G + V+ + + +SF ++  +  +I R   S++V  +LVGNKCDL   + V  + A   A   GIPF+ETSAK+   VE AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDL-PTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIR 164          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAS3_RHIRA (Ras-like protein 3 OS=Rhizomucor racemosus GN=RAS3 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 56/169 (33.14%), Postives = 89/169 (52.66%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQ 659
            +K++++G  GVGKS L ++F    +++ Y  TI   ++ + V  D +T  L + DTAGQE +  +   Y R   G ++VY +T + SF  V  +  +I R    ++   +LVGNKCDL  ++ VS +  +  A   G PF ETSAK    V+  F  +   I+     Q
Sbjct:   10 YKIVIVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCVIDD-ETALLDVLDTAGQEEYSAMREQYMRNGEGFVLVYSITSRLSFEEVNTFYQQIRRVKDRDSFPMVLVGNKCDLEGDRQVSSQEGRDLAKSFGCPFSETSAKQRIRVDDTFYEVVREIRRMNKEQ 177          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: GSP2_YEAST (GTP-binding nuclear protein GSP2/CNR2 OS=Saccharomyces cerevisiae GN=GSP2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.159e-22
Identity = 66/196 (33.67%), Postives = 102/196 (52.04%), Query Frame = 3
Query:  135 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK-NRMASQPASNNARPPTVQIRGQPVNQ 719
            NN     FKL+L+GD G GK+  + R     + + YI+TIGV+    +   +   IK  +WDTAGQE+F  +   YY  A   I+++DVT + ++ NV  W  ++ R   EN+  +L GNK D+   KV +      F  +  + + + SAKS  N E+ F+ +A  +  N      AS    PP VQ+  Q ++Q
Sbjct:    7 NNAEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVR-VCENIPIVLCGNKVDVKERKVKA--KTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPALAPPEVQVDEQLMHQ 199          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAS1_DROWI (Ras-like protein 1 OS=Drosophila willistoni GN=Ras85D PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.125e-22
Identity = 59/163 (36.20%), Postives = 95/163 (58.28%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   +E V  +LVGNKCDL +  V + E A+  A + GIP++ETSAK+   V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLPSWNVQN-EQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAS1_DROGR (Ras-like protein 1 OS=Drosophila grimshawi GN=Ras85D PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.125e-22
Identity = 59/163 (36.20%), Postives = 95/163 (58.28%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 641
            +KL+++G  GVGKS L ++   + +++ Y  TI   ++ + V  DG+T  L I DTAGQE +  +   Y R   G ++V+ V   +SF ++  +  +I R   +E V  +LVGNKCDL +  V + E A+  A + GIP++ETSAK+   V+ AF  +   I+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGTYREQIKRVKDAEEVPMVLVGNKCDLPSWNVQN-EQAREVAKQYGIPYIETSAKTRMGVDDAFYTLVREIR 164          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAP1_PHYPO (Ras-related protein Rap-1 OS=Physarum polycephalum GN=RAP1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.125e-22
Identity = 59/166 (35.54%), Postives = 92/166 (55.42%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTANKVVSYETAKAFADEI-GIPFMETSAKSATNVEQAFMAMAASIKNR 647
            FK++++G  GVGKS L ++F    ++E Y  TI   ++ + VE DG+   L+I DTAG E+F  +   Y +   G ++VY +    +FN++     +I R    ++V  +LVGNKCDL   +V+S E     A +  G  F+E SAK+  NVEQ F  +   I  +
Sbjct:    6 FKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDGQQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSIIAMSTFNDLPDLREQILRVKDCDDVPMVLVGNKCDLAEQRVISTEQGDELARKFGGCAFLEASAKNKINVEQIFYDLIRQINRK 170          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASC_DICDI (Ras-like protein rasC OS=Dictyostelium discoideum GN=rasC PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.037e-22
Identity = 62/180 (34.44%), Postives = 92/180 (51.11%), Query Frame = 3
Query:  153 LFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKL-LVGNKCDL-TANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP 686
            L KL+++GD GVGKS L ++   + ++  Y  TI   ++ + V  D +   L I DTAGQE +  +   Y R   G ++VY +  + SF  V  +  +I R    +   + ++GNK DL   ++ V     K  A   G PF+ETSAKS  NVE+AF  +   IK R    P +    PP
Sbjct:    4 LLKLVIVGDGGVGKSALTIQLTQNQFIAEYDPTIENSYR-KQVNIDEEVYMLDILDTAGQEEYSAMRDQYIRSGRGFLIVYSIISRASFEAVTTFREQILRVKDLSTYPIVIIGNKADLPDKDRKVPPMEGKELAKSFGAPFLETSAKSRVNVEEAFFTLVREIK-RWNQNPQNEEMLPP 181          
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAPA_DICDI (Ras-related protein rapA OS=Dictyostelium discoideum GN=rapA PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.037e-22
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 3
Query:  156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTANKVVSYETAKAFADEIG-IPFMETSAKSATNVEQAFMAMAASIKNRMASQPAS 668
            FK++++G  GVGKS L ++F    ++E Y  TI   ++ + VE D     L+I DTAG E+F  +   Y +   G ++VY +    +FN +     +I R    E+V  +LVGNKCDL   +V+S E  +  A + G   F+E SAK+  NVEQ F  +   I  +    P S
Sbjct:    6 FKIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDSNQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSIISNSTFNELPDLREQILRVKDCEDVPMVLVGNKCDLHDQRVISTEQGEELARKFGDCYFLEASAKNKVNVEQIFYNLIRQINRKNPVGPPS 177          
The following BLAST results are available for this feature:
BLAST of CN185844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASN_MOUSE3.159e-2236.20GTPase NRas OS=Mus musculus GN=Nras PE=2 SV=1[more]
RASN_MONDO3.159e-2236.20GTPase NRas OS=Monodelphis domestica GN=NRAS PE=2 ... [more]
RASN_HUMAN3.159e-2236.20GTPase NRas OS=Homo sapiens GN=NRAS PE=1 SV=1[more]
RAS3_RHIRA3.159e-2233.14Ras-like protein 3 OS=Rhizomucor racemosus GN=RAS3... [more]
GSP2_YEAST3.159e-2233.67GTP-binding nuclear protein GSP2/CNR2 OS=Saccharom... [more]
RAS1_DROWI4.125e-2236.20Ras-like protein 1 OS=Drosophila willistoni GN=Ras... [more]
RAS1_DROGR4.125e-2236.20Ras-like protein 1 OS=Drosophila grimshawi GN=Ras8... [more]
RAP1_PHYPO4.125e-2235.54Ras-related protein Rap-1 OS=Physarum polycephalum... [more]
RASC_DICDI7.037e-2234.44Ras-like protein rasC OS=Dictyostelium discoideum ... [more]
RAPA_DICDI7.037e-2235.26Ras-related protein rapA OS=Dictyostelium discoide... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001P07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001P07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185844 ID=CN185844; Name=CN185844; organism=Citrus sinensis; type=EST; length=752bp
GAGGCTCCATCCATCTCTCCCTACGTCGAAGCAGTTTTCATTTGCGATCA
ATTTTTCTTGCCGGAAATTAAAATTTCTCATCATCTCGTCGAAGTTTCTG
TGATTCATTCGATCCAACGCACGGCACGACCATGAATAACGAATACGATT
ATTTGTTTAAGCTTTTGCTCATAGGCGATTCTGGTGTTGGCAAATCGTGT
CTACTTTTGAGGTTTGCTGATGATTCTTATCTGGAAAGCTACATTAGCAC
CATTGGAGTTGACTTTAAAATCCGCACTGTGGAACAAGATGGCAAAACCA
TTAAGCTCCAAATTTGGGACACTGCTGGCCAAGAGCGTTTTAGGACAATA
ACCAGCAGCTACTATCGTGGGGCTCATGGCATCATTGTTGTTTATGATGT
CACAGATCAAGAGAGCTTCAACAATGTAAAGCAATGGCTGAATGAAATTG
ACCGATATGCAAGTGAAAATGTGAACAAGCTTTTAGTTGGTAACAAGTGT
GATCTCACAGCGAACAAAGTTGTGTCCTATGAGACAGCCAAGGCATTTGC
GGATGAAATTGGGATTCCTTTCATGGAAACAAGTGCTAAAAGTGCCACCA
ACGTCGAACAGGCTTTCATGGCCATGGCTGCTTCAATCAAGAATAGGATG
GCAAGCCAACCTGCCTCGAACAATGCTAGGCCGCCAACAGTGCAGATCCG
AGGACAGCCTGTCAACCAGAAATCTGGTTGCTGCTCCACTTAGAAGGGAA
TT
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