CN185844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAP1A_RAT (Ras-related protein Rap-1A OS=Rattus norvegicus GN=Rap1a PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.561e-21 Identity = 59/166 (35.54%), Postives = 93/166 (56.02%), Query Frame = 3 Query: 156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 647 +KL+++G GVGKS L ++F ++E Y TI ++ + VE D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +E+V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAP1A_MOUSE (Ras-related protein Rap-1A OS=Mus musculus GN=Rap1a PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.561e-21 Identity = 59/166 (35.54%), Postives = 93/166 (56.02%), Query Frame = 3 Query: 156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 647 +KL+++G GVGKS L ++F ++E Y TI ++ + VE D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +E+V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAP1A_HUMAN (Ras-related protein Rap-1A OS=Homo sapiens GN=RAP1A PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.561e-21 Identity = 59/166 (35.54%), Postives = 93/166 (56.02%), Query Frame = 3 Query: 156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 647 +KL+++G GVGKS L ++F ++E Y TI ++ + VE D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +E+V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAP1A_BOVIN (Ras-related protein Rap-1A OS=Bos taurus GN=RAP1A PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.561e-21 Identity = 59/166 (35.54%), Postives = 93/166 (56.02%), Query Frame = 3 Query: 156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 647 +KL+++G GVGKS L ++F ++E Y TI ++ + VE D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +E+V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: DJ27B_XENLA (DnaJ homolog subfamily C member 27-B OS=Xenopus laevis GN=dnajc27-B PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.561e-21 Identity = 50/168 (29.76%), Postives = 94/168 (55.95%), Query Frame = 3 Query: 159 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS--------ENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI 638 K++ +G++ VGKSC++ R+ + ++ Y +TIG+D+ + V+ + IK+ I+D AG F + + +Y+ G+I+VYDV +ESF ++ WL E+ + +N+ + NK D T ++ V + +++ G + ETSA+S + + F A +SI Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVPKYQATIGIDYGVTKVQIKDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFESLDAWLAEMKQELGPQINIDNLDNIVFAVCANKIDSTKHRCVDESEGRLWSESKGFLYFETSAQSGEGINEMFQAFYSSI 185
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RASU_DICDI (Ras-like protein rasU OS=Dictyostelium discoideum GN=rasU PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.957e-21 Identity = 53/165 (32.12%), Postives = 92/165 (55.76%), Query Frame = 3 Query: 135 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMA 629 N+ + +L ++GD GVGK+ + ++F + ++ Y TI D + D + L I DTAGQ+ I + + + G I+VY VT + SF+ ++ +L++I SE V +++ NK DL + V+Y+ + FA+ G+ FME SAK N+++ F +A Sbjct: 8 NSNNNNSMRLCVMGDGGVGKTSITIQFISNHFVNCYDPTIE-DLYRKQCLIDDQVYMLDILDTAGQDELNAIRNHWIKSCEGFILVYSVTSRSSFDQIQSFLDQIKFLKSEKVPIIMIANKSDLDDERQVTYQEGENFANRFGMSFMEVSAKYKLNIDEVFNQIA 171
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAP1B_RAT (Ras-related protein Rap-1b OS=Rattus norvegicus GN=Rap1b PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.957e-21 Identity = 58/166 (34.94%), Postives = 93/166 (56.02%), Query Frame = 3 Query: 156 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYA-SENVNKLLVGNKCDLTANKVVSYETAKAFADE-IGIPFMETSAKSATNVEQAFMAMAASIKNR 647 +KL+++G GVGKS L ++F ++E Y TI ++ + VE D + L+I DTAG E+F + Y + G +VY +T Q +FN+++ +I R +++V +LVGNKCDL +VV E + A + F+E+SAKS NV + F + I + Sbjct: 4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWSNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RAB24_MOUSE (Ras-related protein Rab-24 OS=Mus musculus GN=Rab24 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.957e-21 Identity = 58/162 (35.80%), Postives = 87/162 (53.70%), Query Frame = 3 Query: 159 KLLLIGDSGVGKSCLLLRFADDSYLES-YISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL----TANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMA 629 K++++G VGK+ L+ R+ D +L Y +TIG F + + +T+ L IWDTAG ER+ ++ YYRGA IV YD+TD SF K W+ E+ R E L G K DL + V + + +AD I ETS+K+ +V++ F +A Sbjct: 9 KVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMCVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKEL-RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVA 169
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: DJC27_RAT (DnaJ homolog subfamily C member 27 OS=Rattus norvegicus GN=Dnajc27 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.957e-21 Identity = 47/165 (28.48%), Postives = 94/165 (56.97%), Query Frame = 3 Query: 159 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS-----ENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI 638 K++ +G++ VGKSC++ R+ + ++ Y++TIG+D+ + V+ + IK+ I+D AG F + + +Y+ G+I+VYDV ++SF+ + WL E+ + EN+ ++ NK D + ++ + + +A+ G + ETSA++ + + F SI Sbjct: 18 KVISMGNAEVGKSCIIKRYCEKRFVSKYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFFEVRNEFYKDTQGVILVYDVGQKDSFDALDSWLAEMKQELGPHGNMENIVFVVCANKIDCSKHRCIDESEGRLWAESRGFLYFETSAQTGEGINEMFQTFYMSI 182
BLAST of CN185844 vs. ExPASy Swiss-Prot
Match: RB32D_DICDI (Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.780e-21 Identity = 56/169 (33.14%), Postives = 94/169 (55.62%), Query Frame = 3 Query: 159 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNK---------LLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI 638 KL+LIGD VGK+ +L R + E Y STIG DF +T Q+ +Q+WDTAGQE++ +TS+++R + +I+V+D++++ SF N+ W + + S+++N LL+ NK D V E + D + E SAKS+ N++++ + + I Sbjct: 11 KLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQLWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQ---FKSKSINPDGTEKQLPILLLANKSDSLTRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVI 176 The following BLAST results are available for this feature:
BLAST of CN185844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185844 ID=CN185844; Name=CN185844; organism=Citrus sinensis; type=EST; length=752bpback to top |