CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.103e-33 Identity = 70/173 (40.46%), Postives = 109/173 (63.01%), Query Frame = -1 Query: 293 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-----KNRMASQPASNNARPPTVQIR-------GQPVNQKSGCCST 775 V+F+ RT+ K++K QIWDTAGQER+R +TS+YYRGA G ++VYD+T +++F+++ +WL E+ +A N+ +L+GNK DL + V E AK FA + G+ F+ETSA ATN+E AF+ + I K +A+ +N P ++ + GQ + +K CCS+ Sbjct: 50 VEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKKACCSS 222
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 7.103e-33 Identity = 63/132 (47.73%), Postives = 94/132 (71.21%), Query Frame = -1 Query: 380 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA 775 +DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +V+ E + A+++G F E SAK +V QAF + +I ++M+ Sbjct: 57 IDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS 188
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 7.103e-33 Identity = 64/132 (48.48%), Postives = 94/132 (71.21%), Query Frame = -1 Query: 380 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA 775 +DFK++TV + K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +VV E + A+++G F E SAK +V QAF + +I ++M+ Sbjct: 57 IDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS 188
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33 Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = -1 Query: 296 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 769 F +TV D T+K +IWDTAGQER+ ++ YYRGA IVVYD+T++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK++ NV + FMA+A + P +N+AR V + +S CCS Sbjct: 57 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPAQPARSQCCS 214
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33 Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = -1 Query: 296 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 769 F +TV D T+K +IWDTAGQER+ ++ YYRGA IVVYD+T++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK++ NV + FMA+A + P +N+AR V + +S CCS Sbjct: 57 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRSQCCS 214
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.277e-33 Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = -1 Query: 296 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 769 F +TV D T+K +IWDTAGQER+ ++ YYRGA IVVYD+T++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK++ NV + FMA+A + P +N+AR V + +S CCS Sbjct: 57 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRSQCCS 214
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.212e-32 Identity = 74/171 (43.27%), Postives = 105/171 (61.40%), Query Frame = -1 Query: 296 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPV-----------NQKSGCCS 775 V+F R++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+T +F NV++WL E+ +A N+ +LVGNK DL + V E A+AF + G+ F+ETSA +TNVE+AF + I + ++ + + P + G+ V +K GCCS Sbjct: 47 VEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIG-EGRDVIVIDNAHDDGGKKKGGCCS 216
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.212e-32 Identity = 75/176 (42.61%), Postives = 107/176 (60.80%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM-----------------ASQPASNNARPPTVQIRGQPVNQKSGCC 775 V+F R V+ DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + +++S N+ +L+GNK DL + + V E +AFA E G+ FMETSAK+A NVE+A++ A I ++ Q +++ P + Q + SGCC Sbjct: 41 VEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHNEANGIKIGPQQSITSSVGPCSPQQNVSDIGPDSGCC 216
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.212e-32 Identity = 71/170 (41.76%), Postives = 108/170 (63.53%), Query Frame = -1 Query: 293 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR-GQPV--------NQKSGCCST 775 V+F RT+ +G+T+K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV +WL E+ +A N+ +L+GNK DL + V+ E A+++A++ G+ F+ETSA A NVE+AF + + + ++ + S++ I+ GQ + N K CCS+ Sbjct: 47 VEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.212e-32 Identity = 71/168 (42.26%), Postives = 97/168 (57.74%), Query Frame = -1 Query: 296 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKS--------GCCS 775 V+F +T +GK +K QIWDTAGQER+R ITS+YYRGA G +++YDVT +F N +WL E+ + N+ +L+GNKCDL V E AKAFA+ + FMETSA ATNVE AF + I ++ + + +G+ +N K GCCS Sbjct: 48 VEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINVKEDGSVLKRMGCCS 215 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |