CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.582e-32 Identity = 65/129 (50.39%), Postives = 94/129 (72.87%), Query Frame = -1 Query: 389 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKN 775 V+F+ RT+ D KT+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T +++F+++ +WL E+ +A +N+ +L+GNKCDL + V E AK FA++ G+ F+ETSA ATNVE AF + I N Sbjct: 52 VEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYN 180
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.582e-32 Identity = 78/168 (46.43%), Postives = 106/168 (63.10%), Query Frame = -1 Query: 296 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK---NRMASQPASNNARPPTVQIR---GQPVN--QKSGCCS 775 V+F R+++ D K IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV+ WL E+ + N+ +LVGNK DL V E AK+FA++ + FMETSA ATNVE AF + I ++ A + AS +A P+ + G+ V+ +K GCCS Sbjct: 48 VEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPSKGDKIDIGKDVSAVKKGGCCS 215
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32 Identity = 67/158 (42.41%), Postives = 97/158 (61.39%), Query Frame = -1 Query: 296 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 769 F +TV D T+K +IWDTAGQER+ ++ YYRGA IVVYD+T++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK++ NV + FMA+A + P +N+AR V + ++ CCS Sbjct: 57 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCS 214
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB12_MOUSE (Ras-related protein Rab-12 OS=Mus musculus GN=Rab12 PE=1 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 2.067e-32 Identity = 69/152 (45.39%), Postives = 101/152 (66.45%), Query Frame = -1 Query: 323 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEI-GIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQP 775 VDFKI+TV+ GK I+LQIWDTAGQERF +ITS+YYR A GII+VYD+T +E+F+++ +W+ ID+YASE+ LLVGNK D ++ +S + + FA +I G+ F E SAK NV++ F+ + I +M N + ++ +P Sbjct: 76 VDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRNELSNSILSLQPEP 227
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.699e-32 Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = -1 Query: 296 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 769 F +TV D T+K +IWDTAGQER+ ++ YYRGA IVVYD+T++ESF K W+ E+ R AS N+ L GNK DL + V ++ A+++AD+ + FMETSAK++ NV + FMA+A + P +N+ R V + +S CCS Sbjct: 57 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQNPGANSTRGRGVDLTEPTQPTRSQCCS 214
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.699e-32 Identity = 67/143 (46.85%), Postives = 97/143 (67.83%), Query Frame = -1 Query: 347 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP 775 VDF I+TV+ +G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T +ESF + +WL EI++YAS V +LVGNK DL + VS + A+ F++ + ++ETSAK + NVE+ F+ +A + + NN P Sbjct: 44 VDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.699e-32 Identity = 67/143 (46.85%), Postives = 97/143 (67.83%), Query Frame = -1 Query: 347 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP 775 VDF I+TV+ +G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T +ESF + +WL EI++YAS V +LVGNK DL + VS + A+ F++ + ++ETSAK + NVE+ F+ +A + + NN P Sbjct: 44 VDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.699e-32 Identity = 67/143 (46.85%), Postives = 97/143 (67.83%), Query Frame = -1 Query: 347 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP 775 VDF I+TV+ +G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T +ESF + +WL EI++YAS V +LVGNK DL + VS + A+ F++ + ++ETSAK + NVE+ F+ +A + + NN P Sbjct: 44 VDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSP 186
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB19_HUMAN (Ras-related protein Rab-19 OS=Homo sapiens GN=RAB19 PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.699e-32 Identity = 62/128 (48.44%), Postives = 92/128 (71.88%), Query Frame = -1 Query: 395 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIG-IPFMETSAKSATNVEQAFMAMAASI 775 VDF +R++D DGK +K+Q+WDTAGQERFRTIT SYYR AH I+ YD+T + +F ++ W++EI++Y + NV +L+GNKCDL + V +E A A++ G + +ETSAK + N+E+ F+ MA + Sbjct: 52 VDFTVRSLDIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.699e-32 Identity = 66/153 (43.14%), Postives = 100/153 (65.36%), Query Frame = -1 Query: 320 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIG-IPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPV 775 VDF +R ++ DGK +K+Q+WDTAGQERFRTIT SYYR AH I+ YD+T + +F +V W++EI++Y + N+ +L+GNKCDL + V +E A A++ G + +ETSAK + N+++ F+ MA + R S P P ++ + PV Sbjct: 52 VDFTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELMAR-HSLPLYGEGAPGSLPLESTPV 203 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |