CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RABC_DICDI (Ras-related protein RabC OS=Dictyostelium discoideum GN=rabC PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32 Identity = 67/162 (41.36%), Postives = 102/162 (62.96%), Query Frame = -1 Query: 299 VDFKIRTV--DQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR-GQPVNQKSGCC 775 VDF ++T+ + G+T+KLQ+WDTAGQERF++IT ++YRG+HG+IVVYDVTD +SF K W+ +I++Y + + +LVGNK D+ A + V++E + A+++ F+E SAK V Q F + I+ M + + N Q+ V QK GCC Sbjct: 41 VDFNVKTIRNKETGQTVKLQLWDTAGQERFKSITQTFYRGSHGVIVVYDVTDPKSFERCKNWVEDINQYTQDGMIIILVGNKSDMVAQRKVTFEQGQEMAEQLKTKFLEVSAKENNGVTQVFDLLVQDIEATMKNSKVAQN------QLNLNSEVGQKRGCC 196
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB18_DICDI (Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32 Identity = 77/165 (46.67%), Postives = 107/165 (64.85%), Query Frame = -1 Query: 296 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYAS-ENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI----KNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 775 V+FK++ V DGK + L IWDTAGQE+FR + SSYYRGAHGII+ YDVT +ESF+N+ WLNE++ +A+ N+ KLLVGNK D N+ V+ E FA + + F+E SAKS ++QAF +A I +N +SQP N +V++ +P + G CS Sbjct: 41 VEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKID-KENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQNTSSSQPKQRNT--GSVKVEDEP-DHNQGVCS 201
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32 Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQ----------IRGQPVNQKSGC 775 V+F R ++ G+ IKLQIWDTAGQERFR +T SYYRGA G ++VYD+T + ++N++ WL + + N +L+GNK DL A + V+YE AK FA+E G+ F+E SAK+ NVE AF+ A I + NA VQ + +P Q+ GC Sbjct: 46 VEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGC 213
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32 Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQ----------IRGQPVNQKSGC 775 V+F R ++ G+ IKLQIWDTAGQERFR +T SYYRGA G ++VYD+T + ++N++ WL + + N +L+GNK DL A + V+YE AK FA+E G+ F+E SAK+ NVE AF+ A I + NA VQ + +P Q+ GC Sbjct: 46 VEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGC 213
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32 Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQ----------IRGQPVNQKSGC 775 V+F R ++ G+ IKLQIWDTAGQERFR +T SYYRGA G ++VYD+T + ++N++ WL + + N +L+GNK DL A + V+YE AK FA+E G+ F+E SAK+ NVE AF+ A I + NA VQ + +P Q+ GC Sbjct: 46 VEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGC 213
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32 Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQ----------IRGQPVNQKSGC 775 V+F R ++ G+ IKLQIWDTAGQERFR +T SYYRGA G ++VYD+T + ++N++ WL + + N +L+GNK DL A + V+YE AK FA+E G+ F+E SAK+ NVE AF+ A I + NA VQ + +P Q+ GC Sbjct: 46 VEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGC 213
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4) HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32 Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQ----------IRGQPVNQKSGC 775 V+F R ++ G+ IKLQIWDTAGQERFR +T SYYRGA G ++VYD+T + ++N++ WL + + N +L+GNK DL A + V+YE AK FA+E G+ F+E SAK+ NVE AF+ A I + NA VQ + +P Q+ GC Sbjct: 46 VEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGC 213
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32 Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQ----------IRGQPVNQKSGC 775 V+F R ++ G+ IKLQIWDTAGQERFR +T SYYRGA G ++VYD+T + ++N++ WL + + N +L+GNK DL A + V+YE AK FA+E G+ F+E SAK+ NVE AF+ A I + NA VQ + +P Q+ GC Sbjct: 46 VEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGC 213
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB12_CANFA (Ras-related protein Rab-12 (Fragment) OS=Canis familiaris GN=RAB12 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.525e-32 Identity = 69/152 (45.39%), Postives = 101/152 (66.45%), Query Frame = -1 Query: 323 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEI-GIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQP 775 VDFKI+TV+ GK I+LQIWDTAGQERF +ITS+YYR A GII+VYD+T +E+F+++ +W+ ID+YASE+ LLVGNK D ++ ++ + + FA EI G+ F E SAK NV++ F+ + I +M N + ++ +P Sbjct: 41 VDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQGEKFAHEITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSILSLQPEP 192
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB43L_HUMAN (Putative Rab-43-like protein ENSP00000330714 OS=Homo sapiens PE=5 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 4.604e-32 Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGI-PFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGC 775 VDF ++T++ GK +KLQIWDTAGQERFRTIT SYYR A+G I+ YD+T + SF +V W+ ++ +YA N+ +LL+GNK DL+ + VS A++ A+ I +ETSAK ++NVE+AF+ +A + R P + P +Q+ + + + GC Sbjct: 22 VDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGG-PLFSEKSPDHIQLNSKDIGEGWGC 179 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |