CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.604e-32 Identity = 68/158 (43.04%), Postives = 95/158 (60.13%), Query Frame = -1 Query: 296 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 769 F ++V D T+K +IWDTAGQER+ ++ YYRGA IVVYD+T+QE+F K W+ E+ R AS ++ L GNK DL + ++V YE A+A+AD+ + FMETSAK+A NV F+A+A + + R V + Q KS CCS Sbjct: 57 FLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAGRSRGVDLHEQTQQNKSQCCS 214
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.604e-32 Identity = 69/159 (43.40%), Postives = 104/159 (65.41%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGI-PFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGC 775 VDF ++T++ GK +KLQIWDTAGQERFRTIT SYYR A+G I+ YD+T + SF +V W+ ++ +YA N+ +LL+GNK DL+ + VS A++ A+ I +ETSAK ++NVE+AF+ +A + R P + P +Q+ + + + GC Sbjct: 53 VDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGG-PLFSEKSPDHIQLNSKDIGEGWGC 210
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 137.887 bits (346), Expect = 6.013e-32 Identity = 68/152 (44.74%), Postives = 101/152 (66.45%), Query Frame = -1 Query: 323 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEI-GIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQP 775 VDFKI+TV+ GK I+LQIWDTAGQERF +ITS+YYR A GII+VYD+T +E+F+++ +W+ ID+YASE+ LLVGNK D ++ ++ + + FA +I G+ F E SAK NV++ F+ + I +M N + ++ +P Sbjct: 77 VDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSILSLQPEP 228
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32 Identity = 68/127 (53.54%), Postives = 88/127 (69.29%), Query Frame = -1 Query: 395 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI 775 V+F R + D K IK QIWDTAGQER+R ITS+YYRGA G ++VYD+T Q SF+NV +WL E+ +A N+ +LVGNK DL + VS E A+AFA E + F+ETSA A+NVE+AF + I Sbjct: 45 VEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32 Identity = 71/173 (41.04%), Postives = 105/173 (60.69%), Query Frame = -1 Query: 293 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI------------KNRMASQPASNNARPPTVQIRGQPVNQKSGCCST 775 V+F+ RT+ K++K QIWDTAGQER+R +TS+YYRGA G ++VYD+T +++F+++ +WL E+ +A N+ +L GNK DL + V E AK FA + G+ F+ETSA AT +E AF+ + I +N+ S PAS + V GQ + K CCS+ Sbjct: 50 VEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATKLEDAFLTVLTEIFNIVNKKNLAADENQSNSNPASLTGKKILVPGPGQVIPGKKACCSS 222
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32 Identity = 75/170 (44.12%), Postives = 102/170 (60.00%), Query Frame = -1 Query: 293 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVN---------QKSGCCST 775 V+F R++ D K +K QIWDTAGQER+R ITS+YYRGA G +VVYD+T +F NV++WL E+ + +N+ +LVGNK DL + VS E AKAFA+ FMETSA + NVE AF + I ++ + A P +GQ +N +K GCCS+ Sbjct: 49 VEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEI-YKVVCRKALEVGDDPAALPKGQTINVGKDDVSAVKKVGCCSS 217
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.854e-32 Identity = 67/131 (51.15%), Postives = 94/131 (71.76%), Query Frame = -1 Query: 383 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM 775 V+F R + DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+GNK DL A + V E +AFA E G+ FMETSAK+A NVE+AF+ A I ++ Sbjct: 41 VEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKI 171
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.026e-31 Identity = 68/145 (46.90%), Postives = 100/145 (68.97%), Query Frame = -1 Query: 359 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI------KNRMASQPASNN 775 V+F+ RT+ D +T+K QIWDTAGQER+R +TS+YYRGA G ++VYD+T ++SF++V +WL E+ +A +N+ +L+GNK DL +VV E AK FA+ + FMETSA +TNVE AFM + I KN +A++ ++ Sbjct: 53 VEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSS 197
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.026e-31 Identity = 69/167 (41.32%), Postives = 108/167 (64.67%), Query Frame = -1 Query: 296 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPV--NQKSG-----CCS 775 V+F+ +++ DGK +K QIWDTAGQERFR +TS+YYRGA G +VVYD+T +F NV +WL+E++ ++ V K+L+GNKCDL + + VS E K+ A+ G+ FMETSA +TNV+ AF + I + ++ + ++++ + + + N+ G CCS Sbjct: 47 VEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEELTVNRVSLVKNENEGTKTFSCCS 213
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.340e-31 Identity = 66/131 (50.38%), Postives = 95/131 (72.52%), Query Frame = -1 Query: 383 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM 775 V+F R + DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++++ N+ +L+GNK DL + + V E +AFA E G+ FMETSAK+A+NVE+AF+ A I ++ Sbjct: 41 VEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKI 171 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |