CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.984e-31 Identity = 68/141 (48.23%), Postives = 96/141 (68.09%), Query Frame = -1 Query: 353 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 775 V+F R++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA +TNVE AF + I R+ SQ ++ R Sbjct: 46 VEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRR 185
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 2.984e-31 Identity = 68/141 (48.23%), Postives = 96/141 (68.09%), Query Frame = -1 Query: 353 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 775 V+F R++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA +TNVE AF + I R+ SQ ++ R Sbjct: 46 VEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEI-YRIVSQKQMSDRR 185
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB5C_CANFA (Ras-related protein Rab-5C OS=Canis familiaris GN=RAB5C PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.984e-31 Identity = 66/158 (41.77%), Postives = 95/158 (60.13%), Query Frame = -1 Query: 296 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 769 F +TV D T+K +IWDTAGQER+ ++ YYRGA IVVYD+T+ ++F K W+ E+ R AS N+ L GNK DL + + V ++ A+A+AD+ + FMETSAK+A NV + FMA+A + A +R V ++ +S CCS Sbjct: 58 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPSRNRGVDLQENSPASRSQCCS 215
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.898e-31 Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = -1 Query: 296 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVN--------QKSGCCS 775 V+F R++ DGK +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +LVGNK DL V + KAFA+ + FMETSA +TNVE AF + I ++ + + +G+ +N +K GCCS Sbjct: 49 VEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSGPGKGEKINIKDDVSAVKKGGCCS 216
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB5C_MOUSE (Ras-related protein Rab-5C OS=Mus musculus GN=Rab5c PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 3.898e-31 Identity = 66/158 (41.77%), Postives = 94/158 (59.49%), Query Frame = -1 Query: 296 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 769 F +TV D T+K +IWDTAGQER+ ++ YYRGA IVVYD+T+ ++F K W+ E+ R AS N+ L GNK DL + + V ++ A+A+AD+ + FMETSAK+A NV + FMA+A + A R V ++ +S CCS Sbjct: 58 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPGRTRGVDLQESNPASRSQCCS 215
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31 Identity = 70/168 (41.67%), Postives = 104/168 (61.90%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQ---------IRGQPVNQKSGCC 775 V+F RT+ +GKTIK Q+WDTAGQER+R ITS+YYRGA G ++VYD+ Q ++ +V++W+ E+ A N+ +LVGNK DL + VS + AK F+++ + F+ETSA ++NVE AF + I + M S+P+ + T+ +P KSGCC Sbjct: 48 VEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIM-SRPSHSTGPQTTIDSNTETIILPTTSEPPAAKSGCC 214
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31 Identity = 73/168 (43.45%), Postives = 99/168 (58.93%), Query Frame = -1 Query: 296 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI----KNRMASQPASNNARPP---TVQIRGQ-PVNQKSGCCS 775 V+F RT+ DGK +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT + +F NV +WL E+ + N+ +LVGNK DL V E K++A++ + FMETSA ATNVE AF + I + NA P ++++ +K GCCS Sbjct: 48 VEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIEVKNDVSALKKLGCCS 215
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.648e-31 Identity = 74/170 (43.53%), Postives = 100/170 (58.82%), Query Frame = -1 Query: 296 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPT--VQIRGQPVN--------QKSGCCS 775 V+F ++++ DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F +WL E+ + N+ +L+GNK DL VS E KAFA++ + FMETSA ATNVE AF + I ++ + RP T V +GQ +N + CCS Sbjct: 48 VEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINVNEDSSVLNRYRCCS 217
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.648e-31 Identity = 72/171 (42.11%), Postives = 101/171 (59.06%), Query Frame = -1 Query: 293 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQ--PASNNARPPTVQIRGQPVNQKS--------GCCST 775 V+F +T++ D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT + +F N +WL E+ + N+ +L+GNK DL V E K+FA+ + FMETSA ATNVE AF + I ++ + A ++ + +GQ +N K GCCST Sbjct: 48 VEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINVKEDSSVLKRFGCCST 218
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11A_BOVIN (Ras-related protein Rab-11A OS=Bos taurus GN=RAB11A PE=2 SV=3) HSP 1 Score: 134.42 bits (337), Expect = 6.648e-31 Identity = 68/141 (48.23%), Postives = 95/141 (67.38%), Query Frame = -1 Query: 353 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR 775 V+F R++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ G+ F+ETSA TNVE AF + I R+ SQ ++ R Sbjct: 46 VEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDYTNVEAAFQTILTEI-YRIVSQKQMSDRR 185 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |