CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30 Identity = 75/173 (43.35%), Postives = 104/173 (60.12%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAF---------MAMAASIKNRMASQPASNN-----ARPPTVQIRGQPVNQKSGCC 775 V+F R++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ + F+ETSA +TNVE+AF + I +R A + N + PPT GQ N K CC Sbjct: 46 VEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQISDRSAHDESPGNNVVDISVPPTTD--GQKSN-KLQCC 215
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30 Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNAR--------------PPTVQIRGQPVNQKSGCC 775 V+F R++ DGKTIK QIWDTAGQER+R ITS+YYRGA G ++VYD+ ++ NV++WL E+ +A N+ +LVGNK DL + V + A+AFA++ + F+ETSA +TNVE+AF + I ++ + ++ A PPT GQ N K CC Sbjct: 46 VEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVVDISVPPTTD--GQKPN-KLQCC 215
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30 Identity = 65/133 (48.87%), Postives = 92/133 (69.17%), Query Frame = -1 Query: 377 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMAS 775 V+F R V+ GKT+KLQIWDTAGQERFR++T SYYRGA G ++VYD+T +E++N++ WL + AS N+ +L GNK DL + V++ A FA E + F+ETSA + NVE+AF+ A +I N++ S Sbjct: 43 VEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDS 175
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30 Identity = 65/133 (48.87%), Postives = 92/133 (69.17%), Query Frame = -1 Query: 377 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMAS 775 V+F R V+ GKT+KLQIWDTAGQERFR++T SYYRGA G ++VYD+T +E++N++ WL + AS N+ +L GNK DL + V++ A FA E + F+ETSA + NVE+AF+ A +I N++ S Sbjct: 43 VEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDS 175
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30 Identity = 65/133 (48.87%), Postives = 92/133 (69.17%), Query Frame = -1 Query: 377 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMAS 775 V+F R V+ GKT+KLQIWDTAGQERFR++T SYYRGA G ++VYD+T +E++N++ WL + AS N+ +L GNK DL + V++ A FA E + F+ETSA + NVE+AF+ A +I N++ S Sbjct: 43 VEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDS 175
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30 Identity = 65/133 (48.87%), Postives = 92/133 (69.17%), Query Frame = -1 Query: 377 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMAS 775 V+F R V+ GKT+KLQIWDTAGQERFR++T SYYRGA G ++VYD+T +E++N++ WL + AS N+ +L GNK DL + V++ A FA E + F+ETSA + NVE+AF+ A +I N++ S Sbjct: 43 VEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDS 175
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.526e-30 Identity = 64/158 (40.51%), Postives = 91/158 (57.59%), Query Frame = -1 Query: 296 FKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCS 769 F +TV D T+K +IWDTAGQER+ ++ YYRGA IVVYD+T+ ++F K W+ E+ R AS N+ L GNK DL + V ++ A+ +AD+ + FMETSAK+A NV + FMA+A + R V ++ +S CCS Sbjct: 58 FLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCS 215
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.300e-30 Identity = 59/128 (46.09%), Postives = 90/128 (70.31%), Query Frame = -1 Query: 395 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIG-IPFMETSAKSATNVEQAFMAMAASI 775 VDF +R ++ +GK +K+Q+WDTAGQERFRTIT SYYR AHG I+ YD+T ++SF +V W+ E ++Y + N+ +L+GNK DL + + +E A A++ G + +ETSAK + NV++ F+ MA + Sbjct: 50 VDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKEL 177
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30 Identity = 64/133 (48.12%), Postives = 92/133 (69.17%), Query Frame = -1 Query: 377 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMAS 775 V+F + ++ GK +KLQIWDTAGQERFR++T SYYRGA G ++VYD+T +E++N + WL + AS+N+ +L GNK DL A++ V++ A FA E + F+ETSA + NVE+AFM A I N++ S Sbjct: 43 VEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIES 175
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.309e-30 Identity = 59/128 (46.09%), Postives = 91/128 (71.09%), Query Frame = -1 Query: 395 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIG-IPFMETSAKSATNVEQAFMAMAASI 775 VDF +R+++ DGK +K+Q+WDTAGQERFRTIT SYYR AH I+ YD+T + +F +V W++EI++Y + N+ +L+GNK DL + V +E A A++ G + +ETSAK + N+++ F+ MA + Sbjct: 52 VDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKEL 179 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |