CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.643e-47 Identity = 88/159 (55.35%), Postives = 119/159 (74.84%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 +DFKIRT++ +GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD++SF +++ W+ I+++AS++VNK+L+GNKCD+T KVV K+ ADE GI F+ETSAK++ NVE+AF+ +A IK RM P P I P N+K+ CC Sbjct: 50 IDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTP-----NDPDHTICITPNNKKNTCC 203
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.743e-45 Identity = 91/166 (54.82%), Postives = 119/166 (71.69%), Query Frame = -1 Query: 293 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPP-TVQIRGQPVNQ---KSGCCST 775 +DFKIRT++ DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+ +K V +A ADE GI F ETSAK+ NVE+ F ++A IK R+A A+P T++ Q NQ KS CC + Sbjct: 50 IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITIKPADQSGNQAAAKSACCGS 215
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.380e-44 Identity = 80/128 (62.50%), Postives = 108/128 (84.38%), Query Frame = -1 Query: 392 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIK 775 VDF IRT++ DGK IKLQIWDTAGQERF+TIT+SYYRGAHG+I+VYD+T +SFN++K+WL ++DR+AS +V KL+VGNKCDL + + V ++ AK FADE+ IP METSAK +T +++AF+ +A+ IK Sbjct: 68 VDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIK 195
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.074e-44 Identity = 91/170 (53.53%), Postives = 119/170 (70.00%), Query Frame = -1 Query: 293 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQI--------RGQPVNQKSGCCST 775 +DFKIRT++ DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK D+ +K V +A ADE GI F ETSAK+ NVE+ F ++ IK R++ + A P T++I GQ QKS CC T Sbjct: 50 IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSD--TDSRAEPATIKISQTDQAAGAGQ-ATQKSACCGT 216
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.848e-44 Identity = 92/167 (55.09%), Postives = 116/167 (69.46%), Query Frame = -1 Query: 278 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCCST*KGIS 775 +DFKI+ VD DGK +KLQIWDTAGQERFRTITS+YYRGA GII+VYD+TD+ SFNNV+ W+ I+++AS+NVNK+LVGNK DL +K VVS +A ADE G F ETSAK +VE+AF+A+A + RM + A+ QPV SG S +G S Sbjct: 48 IDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQLLQQQQLSAAQPVRLTSGSPSPAQGKS 214
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.877e-42 Identity = 80/142 (56.34%), Postives = 110/142 (77.46%), Query Frame = -1 Query: 356 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM--ASQPASNNA 775 +DFKIRT++ DGK IKLQIWDTAGQERFRTIT++YYRGA GI+++YDVTD++SF+NV+ W + ++++ASENV K+L+GNKCD + VS+E +A ADE+G+ F+E SAK+ NV++AF +A IK + A SN A Sbjct: 44 IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQA 185
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.865e-41 Identity = 80/159 (50.31%), Postives = 111/159 (69.81%), Query Frame = -1 Query: 299 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQPVNQKSGCC 775 +DFKIRT+D + +KLQ+WDTAGQERFRTIT++YYRGA GI++VYDVTD++SFNN++ W + YA+E V +LVGNKCDL +VVS E +A AD+ GIPF+E S+K+ NVE+ F ++A I++ +A + N + + I N S CC Sbjct: 46 IDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVA-KTKGNESGSGGINIAEGEENSASKCC 203
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 5.426e-41 Identity = 81/138 (58.70%), Postives = 103/138 (74.64%), Query Frame = -1 Query: 365 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI-KNRMASQPAS 775 VD+K + + DG+T LQIWDTAGQERFRTITSS+YRGAHG++V YDVTDQ ++NNV+ W+ EI RYA V+++LVGNKCDL K+V+ A+ +AD +GIPFME SA + NVE+AFMAMA I +N M S Sbjct: 41 VDYKNKNIVIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDLEDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEIYRNHMGGSKPS 178
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.256e-41 Identity = 78/148 (52.70%), Postives = 107/148 (72.30%), Query Frame = -1 Query: 332 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR 775 +DF+IRTVD +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ A + V E A A E GI F ETSAKS+ NV++AF ++A I + + NN +PP+ ++ Sbjct: 43 IDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLK 190
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.209e-40 Identity = 78/148 (52.70%), Postives = 107/148 (72.30%), Query Frame = -1 Query: 332 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIR 775 +DFKIRTVD +GK IKLQ+WDTAGQERF+TIT++YYRGA GII+VYD+TD++SF N++ W+ I AS V +LL+GNKCD+ A + V E A A E GI F ETSAKS+ NV++AF ++A I + + + N +PP+ ++ Sbjct: 43 IDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLK 190 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |