CN185843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.912e-35 Identity = 78/138 (56.52%), Postives = 99/138 (71.74%), Query Frame = -1 Query: 374 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI----KNRMASQ 775 VDFKIRTV+ +G+ +KLQIWDTAGQERFRTITS+YYRG HG+IVVYDVT ESF NVK+WL+EI++ ++V ++LVGNK D KVV E A FA ++GI ETSAK NVE+ F + + K+ +A Q Sbjct: 43 VDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.912e-35 Identity = 78/138 (56.52%), Postives = 99/138 (71.74%), Query Frame = -1 Query: 374 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI----KNRMASQ 775 VDFKIRTV+ +G+ +KLQIWDTAGQERFRTITS+YYRG HG+IVVYDVT ESF NVK+WL+EI++ ++V ++LVGNK D KVV E A FA ++GI ETSAK NVE+ F + + K+ +A Q Sbjct: 43 VDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.912e-35 Identity = 78/138 (56.52%), Postives = 99/138 (71.74%), Query Frame = -1 Query: 374 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASI----KNRMASQ 775 VDFKIRTV+ +G+ +KLQIWDTAGQERFRTITS+YYRG HG+IVVYDVT ESF NVK+WL+EI++ ++V ++LVGNK D KVV E A FA ++GI ETSAK NVE+ F + + K+ +A Q Sbjct: 43 VDFKIRTVEINGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.295e-34 Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 775 +DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 57 IDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.295e-34 Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 775 +DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 57 IDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.295e-34 Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 775 +DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 57 IDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.295e-34 Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 775 +DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 57 IDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.295e-34 Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 775 +DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 57 IDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.295e-34 Identity = 74/164 (45.12%), Postives = 105/164 (64.02%), Query Frame = -1 Query: 302 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA-----SQPASNNARP-PTVQIRGQPVNQKSGC 775 +DFK++T+ ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLVGNKCD+ +VVS E + AD +G F E SAK NV+Q F + I +M+ + PA A+ P + + P +Q C Sbjct: 57 IDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAVTGAKQGPQLTDQQAPPHQDCAC 220
BLAST of CN185843 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.691e-34 Identity = 79/170 (46.47%), Postives = 106/170 (62.35%), Query Frame = -1 Query: 296 VDFKIRTVDQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQ--PASNN--------ARPPTVQIRGQPVNQKSGCCS 775 V+F R + D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +LVGNKCDL+ + VSYE + FA E G+ FME SAK+A NVE+AF+ A +I ++ SN A P G +Q GCCS Sbjct: 41 VEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGYAIPGQSGGAGSSSSQGGGCCS 210 The following BLAST results are available for this feature:
BLAST of CN185843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185843 ID=CN185843; Name=CN185843; organism=Citrus sinensis; type=EST; length=775bpback to top |