CN185841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_DIACI (60S ribosomal protein L17 OS=Diaphorina citri GN=RpL17 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.391e-34 Identity = 72/111 (64.86%), Postives = 86/111 (77.48%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 RRA ++L++V + +PF R+ GGVGR AQAK + QGRWP KSA F+L LLKNAESNA+ +GLD D L I HIQVN+A + RRRTYRAHGRINPYMSSPCHIE+ LS Sbjct: 42 RRAIKFLKNVKDQLECVPFRRYNGGVGRCAQAK-QWGTTQGRWPRKSADFLLQLLKNAESNADYRGLDTDRLVIEHIQVNRAPRLRRRTYRAHGRINPYMSSPCHIEVILS 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.424e-33 Identity = 70/111 (63.06%), Postives = 84/111 (75.68%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 ++A +L++V HKQA+PF RF GGVGRTAQ K Q RWPVKS KF DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 42 KKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_YARLI (60S ribosomal protein L17 OS=Yarrowia lipolytica GN=RPL17 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33 Identity = 75/132 (56.82%), Postives = 89/132 (67.42%), Query Frame = -2 Query: 239 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXETQLATSKSKK 634 ++A YL+ V HK+AIPF + G +GRT Q K + RWPVKS KF+ DLL+NA++NAE KGLD + L ISHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL LS ET LA S++ Sbjct: 42 QKALAYLDQVTDHKRAIPFRKHAGSIGRTGQGKEFGVT-KARWPVKSIKFVQDLLQNAQANAETKGLDKETLVISHIQVNQAPKQRRRTYRAHGRINAYQSSPSHIELILSEPAEEIAKAKETSLAHISSRQ 172
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_DICDI (60S ribosomal protein L17 OS=Dictyostelium discoideum GN=rpl17 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33 Identity = 70/110 (63.64%), Postives = 85/110 (77.27%), Query Frame = -2 Query: 302 RAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 631 RAK YL +V+AH++ IPF RF GGVGRT QAK QGRWP KS + IL LL+NAE+NAE KGL+V+ L I+H+QV +AQ+QRRRTYRAHGRINPYM SP +E L+ Sbjct: 45 RAKAYLNNVLAHRECIPFRRFKGGVGRTGQAKI-FGTSQGRWPKKSVEHILSLLQNAEANAEAKGLNVEKLKIAHVQVQRAQQQRRRTYRAHGRINPYMCSPSTVEFILT 153
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_ASPFU (60S ribosomal protein L17 OS=Aspergillus fumigatus GN=rpl17 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.142e-33 Identity = 68/111 (61.26%), Postives = 85/111 (76.58%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 +RA +LE+V + +PF R+ G +GRTAQ K + + RWPVKSA+F+LDLLKNAE+NA+ KGLD L + HIQVNQA K RRRTYRAHGRINPYM++PCHIEL L+ Sbjct: 49 QRALAFLENVKNKTEVVPFRRYAGSIGRTAQGKQWGVS-KARWPVKSAQFLLDLLKNAEANADTKGLDTGNLIVKHIQVNQAPKGRRRTYRAHGRINPYMTNPCHIELILT 158
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.410e-33 Identity = 69/111 (62.16%), Postives = 83/111 (74.77%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 ++A +L++V HKQA+PF RF GGVGRTAQ K Q RWPVKS F DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 42 KKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVNFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_DEBHA (60S ribosomal protein L17 OS=Debaryomyces hansenii GN=RPL17 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.574e-32 Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = -2 Query: 302 RAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 631 RA++YL+ V+ H++AIPF RF +GRT Q K + RWP KS FI DLL+N ++NAE KGLD L +SHIQVNQA KQRRRTYRAHGRIN Y SSPCHIEL L+ Sbjct: 43 RAQKYLDQVLDHQRAIPFRRFNSSIGRTGQGKEFGVT-KARWPAKSVNFIKDLLRNGQANAESKGLDASKLKVSHIQVNQAPKQRRRTYRAHGRINAYQSSPCHIELILT 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17A_YEAST (60S ribosomal protein L17-A OS=Saccharomyces cerevisiae GN=RPL17A PE=1 SV=4) HSP 1 Score: 138.272 bits (347), Expect = 3.507e-32 Identity = 68/110 (61.82%), Postives = 82/110 (74.55%), Query Frame = -2 Query: 302 RAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 631 +A++YLE V+ H++AIPF RF +GRTAQ K + RWP KS KF+ LL+NA +NAE KGLD LY+SHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL ++ Sbjct: 43 KAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_THEPA (60S ribosomal protein L17 OS=Theileria parva GN=RPL17 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.580e-32 Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = -2 Query: 311 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 628 AKRYL DV+ K+ +PF +F GGVGR AQAK + QGRWP KS KF+LDLLKN ESNAEVKGL+ L + H+QVN+A RRR+YRAHGRI P++S PCH+EL Sbjct: 44 AKRYLNDVIERKRCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVEL 148
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_THEAN (60S ribosomal protein L17 OS=Theileria annulata GN=RPL17 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.981e-32 Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = -2 Query: 311 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 628 AKRYL DV+ K+ +PF +F GGVGR AQAK + QGRWP KS KF+LDLLKN ESNAEVKGL+ L + H+QVN+A RRR+YRAHGRI P++S PCH+EL Sbjct: 44 AKRYLNDVIDRKRCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVEL 148 The following BLAST results are available for this feature:
BLAST of CN185841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185841 ID=CN185841; Name=CN185841; organism=Citrus sinensis; type=EST; length=665bpback to top |