CN185841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17B_YEAST (60S ribosomal protein L17-B OS=Saccharomyces cerevisiae GN=RPL17B PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 7.812e-32 Identity = 67/110 (60.91%), Postives = 82/110 (74.55%), Query Frame = -2 Query: 302 RAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 631 +A++YL+ V+ H++AIPF RF +GRTAQ K + RWP KS KF+ LL+NA +NAE KGLD LY+SHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL ++ Sbjct: 43 KAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METBF (50S ribosomal protein L22P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 46/109 (42.20%), Postives = 66/109 (60.55%), Query Frame = -2 Query: 302 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 628 A+++LEDV+A KQA+PF R G G + P GR+PV ++K IL +L+NAESNAE KGL+ +YI+H + + + R RA GR P + +IE+ LS Sbjct: 45 ARKFLEDVIALKQAVPFKRHHDGSGH-----RKGPMAAGRYPVSASKEILKILRNAESNAEYKGLEPANMYITHAAIQRGRVIRGFMPRARGRATPKDTETVNIEMILS 148
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_IGNH4 (50S ribosomal protein L22P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 43/106 (40.57%), Postives = 62/106 (58.49%), Query Frame = -2 Query: 311 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 628 AK YLE V+ ++ +P+ R+ G V ++H GR+PVK+AK+ L LLKN E+NAE KGL+V+ L I HI ++ +R RA GR P H+E+ Sbjct: 48 AKAYLERVIKMEEPVPYRRYHGKVAHKRGLADKHGIPMGRYPVKAAKYFLKLLKNVEANAEFKGLEVEKLKIVHIASHKGMTIKRWMPRAFGRATPEFERRTHLEV 153
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METMA (50S ribosomal protein L22P OS=Methanosarcina mazei GN=rpl22p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15 Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = -2 Query: 302 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 628 A+++LEDV+A KQA+PF R G G + P GR+PV ++K IL +LKNAESNAE KGL+ +YI H + + + RA GR +P + +IE+ LS Sbjct: 45 ARKFLEDVIAMKQAVPFKRHSEGAGH-----RKGPMAGGRYPVSASKEILKVLKNAESNAEYKGLEPANMYIIHAAIQRGRVIHGFMPRARGRASPKDTETVNIEMILS 148
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_THEVO (50S ribosomal protein L22P OS=Thermoplasma volcanium GN=rpl22p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.133e-14 Identity = 41/109 (37.61%), Postives = 66/109 (60.55%), Query Frame = -2 Query: 302 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 628 AK+ LEDV++ K AIP+ R+ V +R G GR+PVK+AK +DLL N E+NAE KG++ D+L I H+ N+ + ++ T +A+GR ++E+ ++ Sbjct: 42 AKQILEDVVSKKYAIPYFRYLDSVS------HRPGKGPGRYPVKAAKVFIDLLSNVENNAEFKGMNTDSLIIKHVAANKGRMIKKYTPKAYGRAGANFKDLINLEVIVT 144
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METBU (50S ribosomal protein L22P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl22p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.480e-14 Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = -2 Query: 302 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 628 A++YLEDV+ KQA+PF R +G + P GR+PVK A +L LLKNAESNAE KGL+ + ++I+H +N+ + RA GR +P + ++E+ +S Sbjct: 45 ARQYLEDVVILKQAVPFGRHNDSLGH-----RKGPMAAGRYPVKVASEMLKLLKNAESNAEYKGLNPEHMFIAHTAMNRGRVIHGMRPRARGRASPENTETVNLEMIIS 148
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METS3 (50S ribosomal protein L22P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.297e-14 Identity = 43/109 (39.45%), Postives = 66/109 (60.55%), Query Frame = -2 Query: 305 RAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 631 +AK YLEDV+ K+++PF R VG K + GR+PVK+A+ +L +L+NAE+NAE KG+D + L+I HI ++ RA GR+ P+ + HI++ L Sbjct: 45 KAKNYLEDVIDMKKSVPFKRHNRQVGHR---KGQEGWAAGRYPVKAAEQVLKVLENAEANAEYKGMDTENLFIEHISSHRGVVLPGVIPRAFGRMTPFNTPTTHIQIVL 150
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METAC (50S ribosomal protein L22P OS=Methanosarcina acetivorans GN=rpl22p PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.346e-14 Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = -2 Query: 302 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 628 A+++LEDV+A KQA+PF + G G + P G++P+ ++K IL +LKNAESNAE KGL+ +YI H + + + RA GR P + +IE+ LS Sbjct: 45 ARKFLEDVIAMKQAVPFKKHHDGSGH-----RKGPMAAGKYPISASKEILKVLKNAESNAEYKGLEPANMYIIHAAIQRGRVIHGFMPRARGRATPKDTETVNIEMILS 148
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_STAMF (50S ribosomal protein L22P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.253e-13 Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVG--RTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 AK+ LE+V+A ++ IPF R+ G + R AK + P G R+PVK+AK++L LL++ E+NA+ KGLD D L I HI ++ +R RA GR P H+E+ + Sbjct: 46 AKKLLENVIALREPIPFKRYKGKLSHKRGLPAKWKWPIG--RYPVKAAKYLLRLLEHVEANADNKGLDKDKLVIVHIAAHKGMTLKRWMPRAFGRATPKFRRTSHVEIVV 153
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_SULAC (50S ribosomal protein L22P OS=Sulfolobus acidocaldarius GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13 Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = -2 Query: 305 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 634 + A+ +L +V+ K+A+PF R+ G + + GR+P K+ K++L LL NAE+NA KGLD+D L I HI ++ +R RA GR HIE+ L Sbjct: 44 KEAREFLNNVLEEKEALPFWRYSHGTSHRSNISRKWKVKSGRYPKKAIKYVLKLLDNAENNANSKGLDIDNLKIVHIAAHKGLVLKRYMTRAFGRSTRKYKYLSHIEVIL 153 The following BLAST results are available for this feature:
BLAST of CN185841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185841 ID=CN185841; Name=CN185841; organism=Citrus sinensis; type=EST; length=665bpback to top |