CN185841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_PYRAB (50S ribosomal protein L22P OS=Pyrococcus abyssi GN=rpl22p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.000e-11 Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 A RYL+DV+A ++ +P R+ G K G GR+PVK AK I +L NA++NA+ KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 47 ALRYLDDVIALRRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVVV 150
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_THEAC (50S ribosomal protein L22P OS=Thermoplasma acidophilum GN=rpl22p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 39/110 (35.45%), Postives = 61/110 (55.45%), Query Frame = -2 Query: 302 RAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 631 RAK ++ V+ AIP+ R+ V +R G GR+PVK+AK LL+N E+NAE KGL+ D L I HI N+ + ++ T +A+GR ++E+ ++ Sbjct: 44 RAKEIIDAVINKTYAIPYFRYLDSVS------HRPGVGPGRYPVKAAKAFKQLLENVENNAEFKGLNTDNLVIKHIAANKGRMIKKYTPKAYGRAGANFKDLINLEIIVT 147
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_SULTO (50S ribosomal protein L22P OS=Sulfolobus tokodaii GN=rpl22p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 37/108 (34.26%), Postives = 60/108 (55.56%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 AK++L +V+ K+A+PF + G + + GR+P K+ K++L +L+NAE+NA KGLD++ + I HI ++ +R RA GR HIE+ L Sbjct: 46 AKQFLNNVLEEKEALPFWKHSHGASHRSNISPKWKVKSGRYPKKAIKYVLKVLENAENNANSKGLDLENVKIVHIAAHKGIILKRYMPRAFGRSTRKYRYTSHIEVIL 153
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METMJ (50S ribosomal protein L22P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.412e-11 Identity = 44/109 (40.37%), Postives = 61/109 (55.96%), Query Frame = -2 Query: 302 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 628 AK YL DV+A K+AIPF RF V + ++ P GR+PVK+A+ + LL++ E NAE GLDV+ L I H N + R RA GR P +IE+ ++ Sbjct: 45 AKAYLTDVVALKKAIPFKRFNRNVAHK-RGLSKWP--AGRYPVKAAEAYIRLLESVEKNAEYIGLDVENLRIDHAAANTGRGLRAFFPRAMGRATPKRRETVNIEIVVT 150
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_PYRFU (50S ribosomal protein L22P OS=Pyrococcus furiosus GN=rpl22p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.457e-11 Identity = 43/108 (39.81%), Postives = 57/108 (52.78%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 A RYL+DV+A K+ +P R+ G K G GR+PVK AK I +L N ++NA KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 47 ALRYLDDVIALKRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNVKNNAVQKGLDPDKLKIIHIAAHKGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_AERPE (50S ribosomal protein L22P OS=Aeropyrum pernix GN=rpl22p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.820e-11 Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 311 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 628 A+RYL V+ ++A+PF R G ++ GR+PVK+A+++L LL N E+NA K LDV+ L I H+ ++ +R RA GR P HIE+ Sbjct: 46 ARRYLRAVIEKREAVPFRRAHGKQAHRRGLADKWGWPVGRYPVKAARYMLKLLDNVEANAANKNLDVERLKIIHVAAHKGITLKRWMPRAWGRATPRNRVHSHIEI 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_SULSO (50S ribosomal protein L22P OS=Sulfolobus solfataricus GN=rpl22p PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 7.602e-11 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 AK +L V+ K+A+PF R+ G + + GR+P K+ + +L +L+NAE+NA KGLDVD L I HI ++ +R RA GR +IE+ L Sbjct: 46 AKDFLNRVLEEKEALPFWRYNKGASHKSNISAKWKIKAGRYPKKAIRQVLKVLENAEANATNKGLDVDKLIIRHIAAHKGITLQRYMPRAFGRATAKYRRTSNIEVIL 153 The following BLAST results are available for this feature:
BLAST of CN185841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185841 ID=CN185841; Name=CN185841; organism=Citrus sinensis; type=EST; length=665bpback to top |