CN185836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14 Identity = 62/208 (29.81%), Postives = 100/208 (48.08%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMN-----HPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 611 KP + ++DV+ I G GTV GRVE GV+K G +V G + +TT V +EM + L E++ GDNVG ++ + +++RG V + K NF +QV ++N +GY P T+ + K T +G+ + K + GD +K +P+ +E RFA+R+ +TV GV+ + K Sbjct: 219 KPFLMAIEDVFSITGRGTVATGRVERGVVKIGDSVEIVGLGATKITT-VTGLEMFQKTLDESIAGDNVGILLRGIQKTEIQRGMVLAKPKS--ITPHTNFEAQVYVLNKEEGGRDTPFFSGYRPQFYVRTTDVTGKIESFCTD----AGEPI----KMVLPGDRIKMKAELIQPIAIERNM------RFAIREGGKTVGAGVVGKILK 409
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_AQUAE (Elongation factor Tu OS=Aquifex aeolicus GN=tufA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14 Identity = 58/201 (28.86%), Postives = 99/201 (49.25%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GRVE GVL+PG +V L T S+EM + L EALPGDN+G ++ V D++RG V + A + F +QV +++ + G + P + + +++ + +L + + + GD +++ P+ +E RFA+R+ +TV GV+ + Sbjct: 218 KPFLMPIEDVFSISGRGTVVTGRVERGVLRPGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLRGVGKDDVERGQVLAQPGSVKAHK--RFRAQVYVLSK--EEGGRHTPFFVNYRPQFYFRTADVTGTV-----VKLPEGVEMVMPGDNVELEVELIAPVALEEGL------RFAIREGGRTVGAGVVTKI 403
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_AQUPY (Elongation factor Tu OS=Aquifex pyrophilus GN=tuf PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.883e-14 Identity = 58/201 (28.86%), Postives = 98/201 (48.76%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GRVE GVL+PG +V L T S+EM + L EALPGDN+G ++ V D++RG V + A F +QV +++ + G + P + + +++ + +L + + + GD +++ P+ +E RFA+R+ +TV GV+ + Sbjct: 218 KPFLMPIEDVFSISGRGTVVTGRVERGVLRPGDEVEIVGLREEPLKTVATSIEMFRKVLDEALPGDNIGVLLRGVGKDDVERGQVLAQPGSVKAHR--KFRAQVYVLSK--EEGGRHTPFFVNYRPQFYFRTADVTGTV-----VKLPEGVEMVMPGDNVELEVELIAPVALEEGL------RFAIREGGRTVGAGVVTKI 403
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_PARD8 (Elongation factor Tu OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=tuf PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14 Identity = 56/206 (27.18%), Postives = 99/206 (48.06%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYP---PLG-RFAVRDMRQTVAVGVIKNVE 608 KP +P++DV+ I G GTV GR+ETG++K G ++ G +G + V VEM + L + GDNVG ++ + ++KRG V + +E + F ++V I+ + G + P + + ++ ++ +I G E+ ++P + +E YP +G RFA+R+ +TV G I +E Sbjct: 209 KPFLMPVEDVFSITGRGTVATGRIETGIVKVGEEVQIIGLGAAGKKSVVTGVEMFRKLLDQGEAGDNVGLLLRGIDKNEIKRGMVICH--PGQVKEHSKFKAEVYILKK--EEGGRHTPFHNKYRPQFYIRTLDVTGEITLPEGTEM----------------VMPGDNVTIEVELIYPVACSVGLRFAIREGGRTVGAGQITELE 394
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_BACWK (Elongation factor Tu OS=Bacillus weihenstephanensis (strain KBAB4) GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 56/201 (27.86%), Postives = 98/201 (48.76%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVT---FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GRVE G++K G VV TT V VEM + L +A GDN+G ++ VA +D++RG V +K + A F ++V +++ + G + P + + +++ I G E+ + GD + + P+ +E + +F++R+ +TV GV+ + Sbjct: 209 KPFLMPIEDVFSITGRGTVATGRVERGIVKVGDVVEIIGLAEENATTTVTGVEMFRKLLDQAQAGDNIGALLRGVAREDIQRGQVL--AKTGSVKAHAKFKAEVFVLSK--EEGGRHTPFFANYRPQFYFRTTDVTGIIQLPEGTEM------VMPGDNIEMTIELIAPIAIEEGT------KFSIREGGRTVGYGVVATI 393
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_HERAU (Elongation factor Tu OS=Herpetosiphon aurantiacus GN=tuf PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13 Identity = 54/201 (26.87%), Postives = 96/201 (47.76%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GR+E G++K G ++ GP TT V VEM + L E GDNVG ++ + D++RG V +K + F ++V ++ + G ++P + V+ +++ I G E+ + GD + + P+ +E +FA+R+ +TV G++ + Sbjct: 214 KPFLMPIEDVFSIKGRGTVVTGRIERGIVKVGDTIEIIGMGPDVRTTAVTGVEMFKKLLDEGRAGDNVGALLRGIERTDVERGQVL--AKPGSIKPHTKFKAEVYVLKK--EEGGRHSPFFSGYRPQFYVRTTDVTGAIGLPEGVEM------VMPGDNIQMTVELIVPVAIEQGL------KFAIREGGRTVGAGIVPEI 398
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_CALS8 (Elongation factor Tu OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=tuf PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13 Identity = 56/201 (27.86%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GRVE G LK G +V F P T V +EM + L EA+ GDNVG ++ + +++RG V +K + F +QV ++ + G + P + + + +++ I G E+ GD + + P+ +E+ RFA+R+ +TV G + + Sbjct: 214 KPFLMPIEDVFSITGRGTVVTGRVERGTLKTGEEVEIVGFAPEPRKTVVTGIEMFRKVLDEAVAGDNVGCLLRGIQKNEVERGQVL--AKPGTIKPHTKFKAQVYVLTK--EEGGRHTPFFNGYRPQFYFRTTDVTGTITLPEGVEM------CMPGDNVEMTVELISPIAIESGL------RFAIREGGRTVGAGSVTTI 398
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_ANATD (Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13 Identity = 56/201 (27.86%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GRVE G LK G +V F P T V +EM + L EA+ GDNVG ++ + +++RG V +K + F +QV ++ + G + P + + + +++ I G E+ GD + + P+ +E+ RFA+R+ +TV G + + Sbjct: 214 KPFLMPIEDVFSITGRGTVVTGRVERGTLKTGEEVEIVGFAPEPRKTVVTGIEMFRKVLDEAVAGDNVGCLLRGIQKNEVERGQVL--AKPGTIKPHTKFKAQVYVLTK--EEGGRHTPFFNGYRPQFYFRTTDVTGTITLPEGVEM------CMPGDNVEMTVELISPIAIESGL------RFAIREGGRTVGAGSVTTI 398
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_FLAPJ (Elongation factor Tu OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=tuf PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 55/201 (27.36%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GR+ETG+ G ++ G LT+ V +EM + L GDN G ++ VA +D+KRG V K + A F ++V I+ + G + P + + V+ +++ I +G E+ + GD + + P+ + RFA+R+ +TV G + + Sbjct: 209 KPFLMPVEDVFTITGRGTVATGRIETGICNTGDPVEIIGMGAEKLTSTVTGIEMFRQILDRGEAGDNAGILLRGVAKEDIKRGMVI--IKPGSVKPHAKFKAEVYILKK--EEGGRHTPFHNNYRPQFYVRTTDVTGVIMLPTGVEM------VMPGDNLTIDVTLLSPIAMSVGL------RFAIREGGRTVGAGQVTEI 393
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_FLAJ1 (Elongation factor Tu OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=tuf PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13 Identity = 55/201 (27.36%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GR+ETGV G ++ G LT+ + VEM + L GDNVG ++ + D+KRG V K + A F ++V I+ + G + P + + V+ +++ I +G E+ + GD +++ P+ + RFA+R+ +TV G + + Sbjct: 209 KPFLMPVEDVFTITGRGTVATGRIETGVANTGDPVEIIGMGAEKLTSTITGVEMFRKILDRGEAGDNVGLLLRGIDKADIKRGMVI--IKPGSVKPHAKFKAEVYILKK--EEGGRHTPFHNNYRPQFYVRTTDVTGVISLPAGVEM------VMPGDNLTIEVALLSPIAMNVGL------RFAIREGGRTVGAGQVTEI 393 The following BLAST results are available for this feature:
BLAST of CN185836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 438
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185836 ID=CN185836; Name=CN185836; organism=Citrus sinensis; type=EST; length=759bpback to top |