CN185836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_FRAP2 (Elongation factor Tu OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=tuf PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 55/201 (27.36%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GR+E GV+ G VV P+ TT V VEM + L + GDNVG V+ + D++RG V K + F ++V +++ + G + P + + +++ ++ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + Sbjct: 209 KPFILPIEDVFSISGRGTVVTGRIERGVINVGDEVEVVGIRPTQKTT-VTGVEMFRKLLDKGEAGDNVGILVRGLKRDDVERGQVL--CKPGSIKPHTKFEAEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDITGAVELPEGVEM------VMPGDNIKMTITLINPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_ENTS8 (Elongation factor Tu OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=tuf1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 59/204 (28.92%), Postives = 97/204 (47.55%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ V Sbjct: 209 KPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKDTAKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGSIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_DESDG (Elongation factor Tu OS=Desulfovibrio desulfuricans (strain G20) GN=tuf PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 53/200 (26.50%), Postives = 92/200 (46.00%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GRVE G++K G + + +TT VEM + L + GDNVG ++ V D++RG V + K + F ++V +++ + G + P + + +++ I G E+ + GD + P+ +E RFA+R+ +TV GV+ + Sbjct: 212 KPFLMPIEDVFSISGRGTVVTGRVERGIIKVGEQIEIVGIKDTMTTTCTGVEMFRKLLDQGQAGDNVGVLLRGVKRDDVERGQVLAAPKSITPHK--KFKAEVYVLSK--EEGGRHTPFFSGYRPQFYFRTTDITGIIGLEEGVEM------VMPGDNATFIVELIHPVAMEQGL------RFAIREGGRTVGAGVVSEI 395
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_DECAR (Elongation factor Tu OS=Dechloromonas aromatica (strain RCB) GN=tuf1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 57/203 (28.08%), Postives = 99/203 (48.77%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGD--AGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 +P +P++DV+ I G GTV GRVE G++K G +V P+ + T VEM + L + GDN+G ++ +D++RG V K + +FTS+V I++ G + P + + + +++ I+ G E+ + GD A +K+I P+ +E RFA+R+ +TV GV+ + Sbjct: 211 QPFLMPVEDVFSISGRGTVVTGRVERGIVKVGEEIEIVGIRPT-VKTICTGVEMFRKLLDQGQAGDNIGALLRGTKREDVERGQVL--CKPGSVKPHTHFTSEVYILSK--DEGGRHTPFFNGYRPQFYFRTTDVTGSIELPEGTEM------VMPGDNIAMTIKLI--APIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJR (Elongation factor Tu OS=Campylobacter jejuni (strain RM1221) GN=tuf PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 53/202 (26.24%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 611 K +P++DV+ I G GTV GR+E GV+K G + TT V VEM + + + GDNVG ++ +++ RG V + K +F ++V I+N G + P + + V+ +++ I G E+ + G+ + + P+ +E + RFA+R+ +TV GV+ + K Sbjct: 214 KDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKS--ITPHTDFEAEVYILNK--DEGGRHTPFFNNYRPQFYVRTTDVTGSIKLADGVEM------VMPGENVRITVSLIAPVALEEGT------RFAIREGGKTVGSGVVSKIIK 399
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJJ (Elongation factor Tu OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=tuf PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 53/202 (26.24%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 611 K +P++DV+ I G GTV GR+E GV+K G + TT V VEM + + + GDNVG ++ +++ RG V + K +F ++V I+N G + P + + V+ +++ I G E+ + G+ + + P+ +E + RFA+R+ +TV GV+ + K Sbjct: 214 KDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKS--ITPHTDFEAEVYILNK--DEGGRHTPFFNNYRPQFYVRTTDVTGSIKLADGVEM------VMPGENVRITVSLIAPVALEEGT------RFAIREGGKTVGSGVVSKIIK 399
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJE (Elongation factor Tu OS=Campylobacter jejuni GN=tuf PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 53/202 (26.24%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 611 K +P++DV+ I G GTV GR+E GV+K G + TT V VEM + + + GDNVG ++ +++ RG V + K +F ++V I+N G + P + + V+ +++ I G E+ + G+ + + P+ +E + RFA+R+ +TV GV+ + K Sbjct: 214 KDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKS--ITPHTDFEAEVYILNK--DEGGRHTPFFNNYRPQFYVRTTDVTGSIKLADGVEM------VMPGENVRITVSLIAPVALEEGT------RFAIREGGKTVGSGVVSKIIK 399
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJD (Elongation factor Tu OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=tuf PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 53/202 (26.24%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 611 K +P++DV+ I G GTV GR+E GV+K G + TT V VEM + + + GDNVG ++ +++ RG V + K +F ++V I+N G + P + + V+ +++ I G E+ + G+ + + P+ +E + RFA+R+ +TV GV+ + K Sbjct: 214 KDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKS--ITPHTDFEAEVYILNK--DEGGRHTPFFNNYRPQFYVRTTDVTGSIKLADGVEM------VMPGENVRITVSLIAPVALEEGT------RFAIREGGKTVGSGVVSKIIK 399
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_CAMJ8 (Elongation factor Tu OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=tuf PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 53/202 (26.24%), Postives = 93/202 (46.04%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFG--PSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 611 K +P++DV+ I G GTV GR+E GV+K G + TT V VEM + + + GDNVG ++ +++ RG V + K +F ++V I+N G + P + + V+ +++ I G E+ + G+ + + P+ +E + RFA+R+ +TV GV+ + K Sbjct: 214 KDFLMPIEDVFSISGRGTVVTGRIEKGVVKVGDTIEIVGIKDTQTTTVTGVEMFRKEMDQGEAGDNVGVLLRGTKKEEVIRGMVLAKPKS--ITPHTDFEAEVYILNK--DEGGRHTPFFNNYRPQFYVRTTDVTGSIKLADGVEM------VMPGENVRITVSLIAPVALEEGT------RFAIREGGKTVGSGVVSKIIK 399
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_BREBN (Elongation factor Tu OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=tuf PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 52/202 (25.74%), Postives = 94/202 (46.53%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 608 KP +P++DV+ I G GTV GRVE G++K G ++ T V VEM + L +A GDN+G ++ V D++RG +K + F ++V +++ + G + P + + +++ I G E+ + GD + P+ +E + RFA+R+ +TV GV+ +++ Sbjct: 210 KPFLMPVEDVFTITGRGTVATGRVERGIVKVGDQVEIIGLAEETKNTTVTGVEMFRKLLDQAQAGDNIGALLRGVDRNDIERG--QCLAKPGSVKPYTKFKAEVYVLSK--EEGGRHTPFFANYRPQFYFRTTDVTGIIQLPEGVEM------IMPGDNTEFTVELIAPVAMEQGT------RFAIREGGRTVGAGVVASID 395 The following BLAST results are available for this feature:
BLAST of CN185836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 438
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185836 ID=CN185836; Name=CN185836; organism=Citrus sinensis; type=EST; length=759bpback to top |