CN185836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11 Identity = 57/201 (28.36%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 15 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 P + ++DV+ I G GTV GRVE G +K G +V GL T V VEM + L EA+ GDNVG ++ + D++RG V +K F + V ++ + G ++P + ++ +++ K+ + E E K + GD + + P+ E RFA+R+ +TV GVI+ + Sbjct: 296 PFLMAIEDVFSITGRGTVATGRVERGTVKVGEIVDI--VGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVL--AKPGTITPHTKFEALVYVLKK--EEGGRHSPFFAGYRPQFYMRTTDVTGKVTVIMSDKGE-ESKMVMPGDRVNMVVELIMPVACEQGM------RFAIREGGKTVGAGVIQKI 483
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_THICR (Elongation factor Tu OS=Thiomicrospira crunogena (strain XCL-2) GN=tuf1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 53/201 (26.37%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++D++ I G GTV GRVETGV+K G +V P+ TT V VEM + L + GDNVG ++ +D++RG V ++ F ++V +++ G + P + + +++ + +G E+ + GD + + P+ + RFA+R+ +TV GV+ + Sbjct: 211 KPFLMPVEDIFSIQGRGTVATGRVETGVVKVGEEIEIVGIRPT-TTTTVTGVEMFRKLLDQGEAGDNVGILLRGTKREDIERGQVLAHK--GTVTPHTKFEAEVYVLSK--DEGGRHTPFFQGYRPQFYFRTTDVTGACELPAGTEM------VMPGDNVQMTVELINPIAMNEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_RALME (Elongation factor Tu OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=tuf1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 54/197 (27.41%), Postives = 94/197 (47.72%), Query Frame = 3 Query: 24 LPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 +P++DV+ I G GTV GR+E GV+K G +V P+ TT VEM + L + GDNVG ++ +D++RG V K + +FT +V I++ G + P + + + +++ I EL ++ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 215 MPVEDVFSISGRGTVVTGRIERGVIKVGEEIEIVGIRPTVKTT-CTGVEMFRKLLDQGQAGDNVGLLLRGTKREDVERGQVL--CKPGSIKPHTHFTGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPQDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_ODOSI (Elongation factor Tu, chloroplastic OS=Odontella sinensis GN=tufA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 53/205 (25.85%), Postives = 90/205 (43.90%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG--LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLG-----RFAVRDMRQTVAVGVIKNV 605 K + ++DV+ I G GTV GR+E GV+K G V G TT + +EM + L E GDNVG ++ V +D++ G V S+ NF S+V ++ G + P + V+ +++ I + + D +V+M+ + T P+ RFA+R+ +T+ GV+ + Sbjct: 219 KTFLMAIEDVFSITGRGTVATGRIERGVVKVGDTVEIVGVGDTQTTTITGIEMFQKTLDEGFAGDNVGILLRGVTREDIEAGMVL--SEPGTITPHTNFESEVYVLTK--DEGGRHTPFFTGYRPQFYVRTTDVTGAITQFTA------------DDGSIVEMVMPGDRIKMTAELIYPVAIEEGMRFAIREGGRTIGAGVVSKI 407
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_NITSB (Elongation factor Tu OS=Nitratiruptor sp. (strain SB155-2) GN=tuf PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 53/201 (26.37%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GR+E GV+K G +V P+ TT V VEM + L + GDNVG ++ ++++RG V ++ F +++ ++ + G + P + V+ +++ I G E+ + GD + P+ +E + RFA+R+ +TV GV+ + Sbjct: 214 KPFLMPIEDVFSISGRGTVVTGRIERGVVKVGDEIEIVGLRPTQKTT-VTGVEMFRKELDQGEAGDNVGVLLRGTKKEEVERGQVL--AQPGTITPHTKFEAEIYVLTK--EEGGRHTPFFSGYRPQFYVRTTDVTGTITLPEGVEM------VMPGDNVKINAELIAPIALEEGT------RFAIREGGRTVGAGVVSKI 397
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_HAEDU (Elongation factor Tu OS=Haemophilus ducreyi GN=tufA PE=3 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 55/202 (27.23%), Postives = 95/202 (47.03%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTE--VKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 611 KP LP++DV+ I G GTV GRVE G++K G V TT+ V VEM + L E G+NVG ++ ++++RG V +K +F S+V +++ + G + P + + +++ I+ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + K Sbjct: 209 KPFLLPIEDVFSISGRGTVVTGRVERGIIKSGEEVEIVGIKETTKTTVTGVEMFRKLLDEGRAGENVGALLRGTKREEIERGQVL--AKPGTITPHTDFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMTVSLIHPIAMDEGL------RFAIREGGRTVGAGVVAKIIK 394
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_FRATW (Elongation factor Tu OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=tuf PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GR+E GV+ G VV P+ TT V VEM + L GDNVG V+ + D++RG V K + F ++V +++ + G + P + + +++ ++ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + Sbjct: 209 KPFILPIEDVFSISGRGTVVTGRIERGVVNVGDEVEVVGIRPTQKTT-VTGVEMFRKLLDRGEAGDNVGILVRGLKRDDVERGQVL--CKPGSIKPHTKFEAEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDITGAVELPEGVEM------VMPGDNVKMTITLINPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_FRATO (Elongation factor Tu OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=tuf PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GR+E GV+ G VV P+ TT V VEM + L GDNVG V+ + D++RG V K + F ++V +++ + G + P + + +++ ++ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + Sbjct: 209 KPFILPIEDVFSISGRGTVVTGRIERGVVNVGDEVEVVGIRPTQKTT-VTGVEMFRKLLDRGEAGDNVGILVRGLKRDDVERGQVL--CKPGSIKPHTKFEAEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDITGAVELPEGVEM------VMPGDNVKMTITLINPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_FRATN (Elongation factor Tu OS=Francisella tularensis subsp. novicida (strain U112) GN=tuf PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GR+E GV+ G VV P+ TT V VEM + L GDNVG V+ + D++RG V K + F ++V +++ + G + P + + +++ ++ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + Sbjct: 209 KPFILPIEDVFSISGRGTVVTGRIERGVVNVGDEVEVVGIRPTQKTT-VTGVEMFRKLLDRGEAGDNVGILVRGLKRDDVERGQVL--CKPGSIKPHTKFEAEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDITGAVELPEGVEM------VMPGDNVKMTITLINPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_FRATM (Elongation factor Tu OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tuf PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11 Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GR+E GV+ G VV P+ TT V VEM + L GDNVG V+ + D++RG V K + F ++V +++ + G + P + + +++ ++ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + Sbjct: 209 KPFILPIEDVFSISGRGTVVTGRIERGVVNVGDEVEVVGIRPTQKTT-VTGVEMFRKLLDRGEAGDNVGILVRGLKRDDVERGQVL--CKPGSIKPHTKFEAEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDITGAVELPEGVEM------VMPGDNVKMTITLINPIAMDEGL------RFAIREGGRTVGAGVVAKI 392 The following BLAST results are available for this feature:
BLAST of CN185836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 438
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185836 ID=CN185836; Name=CN185836; organism=Citrus sinensis; type=EST; length=759bpback to top |