CN185836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_SALAR (Elongation factor Tu OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=tuf1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 59/204 (28.92%), Postives = 97/204 (47.55%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ V Sbjct: 209 KPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_RALSO (Elongation factor Tu OS=Ralstonia solanacearum GN=tufA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 52/196 (26.53%), Postives = 91/196 (46.43%), Query Frame = 3 Query: 24 LPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 +P++DV+ I G GTV GR+E G++K G + T T VEM + L + GDNVG ++ +D++RG V K + +FT +V I++ G + P + + + +++ I EL K+ + + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 215 MPVEDVFSISGRGTVVTGRIERGIIKVGEEIEIVGIKATQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVL--CKPGSIKPHTHFTGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSI------ELPKDKEMVMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_RALEJ (Elongation factor Tu OS=Ralstonia eutropha (strain JMP134) GN=tuf1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 54/197 (27.41%), Postives = 94/197 (47.72%), Query Frame = 3 Query: 24 LPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 +P++DV+ I G GTV GR+E GV+K G +V P+ TT VEM + L + GDNVG ++ +D++RG V K + +FT +V I++ G + P + + + +++ I+ + KE+ + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 215 MPVEDVFSISGRGTVVTGRIERGVIKVGEEIEIVGIRPTVKTT-CTGVEMFRKLLDQGQAGDNVGLLLRGTKREDVERGQVL--CKPGSIKPHTHFTGEVYILSK--DEGGRHTPFFNNYRPQFYFRTTDVTGSIELPADKEM------VMPGDNVSITVKLIAPIAMEEGL------RFAIREGGRTVGAGVVAKI 394
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_POLSJ (Elongation factor Tu OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=tuf1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 52/196 (26.53%), Postives = 91/196 (46.43%), Query Frame = 3 Query: 24 LPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLT--TEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 +P++DV+ I G GTV GRVE GV+K G + T T VEM + L + GDNVG ++ +D++RG V K + +FT ++ +++ G + P + + + +++ I+ GKE+ + GD + + P+ +E RFA+R+ +TV GV+ + Sbjct: 215 MPVEDVFSISGRGTVVTGRVERGVIKVGEEIEIVGIADTQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVQRGQVL--CKPGSIKPHTHFTGEIYVLSK--DEGGRHTPFFNNYRPQFYFRTTDVTGAIELPEGKEM------VMPGDNVSITVKLINPIAMEEGL------RFAIREGGKTVGAGVVAKI 394
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_LAWIP (Elongation factor Tu OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 56/202 (27.72%), Postives = 96/202 (47.52%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKD-DPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP +P++DV+ I G GTV GRVE GV+K G +V P+ + T VEM + L + GDN+G +++V +++RG V S K P R+ F ++V +++ + G + P + + +++ I G E+ + GD + P+ +E RFA+R+ +TV GV+ + Sbjct: 212 KPFLMPIEDVFSISGRGTVVTGRVERGVIKVGEEIEIVGIKPT-IKTTCTGVEMFRKLLDQGEAGDNIGVLLRSVKRDEVERGQVLSALKSITPHRK---FKAEVYVLSK--EEGGRHTPFFSGYRPQFYCRTTDVTGVITLNEGVEM------VMPGDNATFNVELIYPIAMEQGL------RFAIREGGRTVGAGVVTEI 395
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_HELSJ (Elongation factor Tu, plastid OS=Helicosporidium sp. subsp. Simulium jonesii GN=tufA PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 55/207 (26.57%), Postives = 93/207 (44.93%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG--MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKD-DPAREAANFTSQVIIM-----NHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEP-KFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP + ++DV+ I G GTV GR+E G +K G + + G TT V +EM + L + + GDNVG ++ + K++ RG V + K DP +F +QV ++ GY P T+ + +++ + P K GD + + +P+ +E RFA+R+ +TV GV+ + Sbjct: 219 KPFLMAIEDVFSISGRGTVATGRIERGKIKMGDSIEIIGGSLRKTTTVTGIEMFQKTLTDGVAGDNVGILMRGIQKKEIDRGMVLTKPKSIDP---LTSFEAQVYLLTKEEGGRSKGFTIGYRPQFYVRTTDVTGAILNMLSD---------DNTPLKIASPGDRITMSVKLIQPIALEKNM------RFAIREGGKTVGAGVVSKL 407
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_FRATT (Elongation factor Tu OS=Francisella tularensis subsp. tularensis GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GR+E GV+ G VV P+ TT V VEM + L GDNVG V+ + D++RG V K + F ++V +++ + G + P + + +++ ++ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + Sbjct: 209 KPFILPIEDVFSISGRGTVVTGRIERGVVNIGDEVEVVGIRPTQKTT-VTGVEMFRKLLDRGEAGDNVGILVRGLKRDDVERGQVL--CKPGSIKPHTKFEAEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDITGAVELPEGVEM------VMPGDNVKMTITLINPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_FRAT1 (Elongation factor Tu OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tuf PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 55/201 (27.36%), Postives = 93/201 (46.27%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GR+E GV+ G VV P+ TT V VEM + L GDNVG V+ + D++RG V K + F ++V +++ + G + P + + +++ ++ G E+ + GD + + P+ ++ RFA+R+ +TV GV+ + Sbjct: 209 KPFILPIEDVFSISGRGTVVTGRIERGVVNIGDEVEVVGIRPTQKTT-VTGVEMFRKLLDRGEAGDNVGILVRGLKRDDVERGQVL--CKPGSIKPHTKFEAEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDITGAVELPEGVEM------VMPGDNVKMTITLINPIAMDEGL------RFAIREGGRTVGAGVVAKI 392
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_ECOLI (Elongation factor Tu OS=Escherichia coli (strain K12) GN=tufA PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 59/204 (28.92%), Postives = 97/204 (47.55%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ V Sbjct: 209 KPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392
BLAST of CN185836 vs. ExPASy Swiss-Prot
Match: EFTU_ECOL6 (Elongation factor Tu OS=Escherichia coli O6 GN=tufA PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11 Identity = 59/204 (28.92%), Postives = 97/204 (47.55%), Query Frame = 3 Query: 12 KPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 605 KP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV+ V Sbjct: 209 KPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGVVAKV 392 The following BLAST results are available for this feature:
BLAST of CN185836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 438
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185836 ID=CN185836; Name=CN185836; organism=Citrus sinensis; type=EST; length=759bpback to top |