CN185835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.612e-19 Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = -2 Query: 258 REAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 590 R F +Q+I++NHP I GY PVL H +AV+F +L+ K+D R+G +E+ P+F+K GD+ +E + P GRFA+RDM QTVA G++ +++K + Sbjct: 318 RPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.612e-19 Identity = 43/106 (40.57%), Postives = 67/106 (63.21%), Query Frame = -2 Query: 267 AANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVE 584 A ++++++ HP IG GYAPV+ H + + V+ ELV+K+D R+G+ +E++P+F+K GD E FSD+PP GRFA+RDM +T+A G I V+ Sbjct: 332 AEEIVARIVVLWHPTAIGPGYAPVMHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.717e-19 Identity = 43/113 (38.05%), Postives = 68/113 (60.18%), Query Frame = -2 Query: 258 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 596 P A FT ++ ++ HP I GY PVL H + + V F EL+ K+D R+G E++P+++K GD+ VE +S++PP GRFA+RD +T+A GV+ +V+K + Sbjct: 319 PPTVAEEFTGRIFVLYHPTAIAAGYTPVLHIHTATVPVTFEELLQKLDPRTGSVAEEKPQYIKQGDSAIVRFKPRKPVVVEKYSEFPPLGRFAIRDSGRTIAAGVVIDVKKAE 431
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.717e-19 Identity = 43/111 (38.74%), Postives = 67/111 (60.36%), Query Frame = -2 Query: 258 REAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 590 R F +Q+I++NHP I GY PVL H +AV+F +L+ K+D R+G +E+ P+F+K GD+ +E + P GRFA+RDM QTVA G++ +++K + Sbjct: 318 RPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.717e-19 Identity = 41/101 (40.59%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 267 SQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVE 569 ++++++ HP IG GYAPV+ H + + V+ +EL++K+D R+G+ +E++P+F+K GD E FSD+PP GRFA+RDM +T+A G I V+ Sbjct: 337 ARIVVLWHPTAIGPGYAPVMHIHTATVPVQITELISKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.046e-19 Identity = 45/110 (40.91%), Postives = 68/110 (61.82%), Query Frame = -2 Query: 267 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVE 596 P A FT++V I+ HP I GY PV+ H + +A + E+ K+D R+GK +E+ P+F+K GDA VE +SD+PP GRFA+RDM +T+ +GV+ +V+ Sbjct: 320 PPTVAEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.051e-18 Identity = 43/110 (39.09%), Postives = 66/110 (60.00%), Query Frame = -2 Query: 267 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVE 596 P A FT+++++M HP I GY PV+ H + +A + +E++ KID R+GKE+EK P FLK GD VE +SD+ GRFA+RDM +T+ +G + ++ Sbjct: 321 PPTVADEFTARIMVMWHPTAIAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEIK 430
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.372e-18 Identity = 46/112 (41.07%), Postives = 63/112 (56.25%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P A FT+Q++++ HP I GY PV CH + IA F EL K+D RSG+ E+ P FLK+GDA +E+ + P GRFA+RDM T+A G+ V+ K Sbjct: 311 PPTVADEFTAQIVVLQHPSAITVGYTPVFHCHTAQIACTFVELRKKLDPRSGQTKEENPTFLKSGDAAIVQIKPSRPMVIESVKEIPQLGRFAIRDMGTTIAAGMCIAVQPK 422
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.792e-18 Identity = 45/112 (40.18%), Postives = 62/112 (55.36%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P A F +QV++++HP + GY PV CH + IA F EL+ K+D R+G+ E+ P FLK GDA +E + P GRFAVRDM T+A GV ++ K Sbjct: 311 PPTVAEEFIAQVVVLHHPSALTVGYTPVFHCHTAQIACSFVELMKKLDPRTGQVKEENPTFLKTGDAAIVKIRPTQPMVIEKVKEIPQLGRFAVRDMGSTIAAGVCMDITPK 422
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.792e-18 Identity = 41/110 (37.27%), Postives = 68/110 (61.82%), Query Frame = -2 Query: 267 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVE 596 P A FT+++ ++ HP I GY PV+ H + IA + +E+ K+D R+G+ +EK P+FLK GDA +E +S++P GRFA+RDM +T+ +G++ +V+ Sbjct: 321 PPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGIVVDVK 430 The following BLAST results are available for this feature:
BLAST of CN185835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185835 ID=CN185835; Name=CN185835; organism=Citrus sinensis; type=EST; length=597bpback to top |