CN185835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_PYRFU (Elongation factor 1-alpha OS=Pyrococcus furiosus GN=tuf PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 39/109 (35.78%), Postives = 66/109 (60.55%), Query Frame = -2 Query: 264 REAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEK 590 R F +Q+I++NHP I GY+PVL H + + V+F +L+ K+D ++G +E+ P+F+K GDA +E + P GRFA+RDM T+A G++ ++++ Sbjct: 318 RTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 426
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.517e-17 Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = -2 Query: 261 FTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 575 FT+Q+I++NHP I GY PV H + +A + E+V ++ + G L+++P F+KNGD +E S+ P GRFAVRDM QTVA G ++EK+ Sbjct: 320 FTAQIIVLNHPSVIAPGYKPVFHVHTAQVACRIDEIVKTLNPKDGTTLKEKPDFIKNGDVAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 4.415e-17 Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = -2 Query: 270 AANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNV 584 A F +Q++++ HPG I GY PV CH S +A F EL K+D +G+ E+ P FLK G+A +E P GRFA+RDM QTVA G+ +V Sbjct: 305 AKEFDAQIVVLQHPGVITVGYTPVFHCHTSQVACTFLELTAKLDPATGQVAEENPDFLKTGNAAFVKVKPTKPMVIENAKKIPQMGRFAIRDMGQTVAAGLCIDV 409
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.766e-17 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = -2 Query: 258 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 596 P A +FT+Q++++ HP + +GY PV H + IA F+E+ K++ +G+ LE+ P FLK GDA +E+ + P GRFA+RDM TVA G+ V K+ Sbjct: 315 PPTVATDFTAQIVVLQHPSVLTDGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.766e-17 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 258 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 596 P AA+FT+Q++++ HP + GY PV H + IA F EL K++ +G+ LE+ P FLK GDA +E+ + P GRFA+RDM TVA G+ V K+ Sbjct: 315 PPTVAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METM7 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=tuf PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.766e-17 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 258 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 596 P AA+FT+Q++++ HP + GY PV H + IA F EL K++ +G+ LE+ P FLK GDA +E+ + P GRFA+RDM TVA G+ V K+ Sbjct: 315 PPTVAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.766e-17 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 258 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 596 P AA+FT+Q++++ HP + GY PV H + IA F EL K++ +G+ LE+ P FLK GDA +E+ + P GRFA+RDM TVA G+ V K+ Sbjct: 315 PPTVAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.766e-17 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 258 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 596 P AA+FT+Q++++ HP + GY PV H + IA F EL K++ +G+ LE+ P FLK GDA +E+ + P GRFA+RDM TVA G+ V K+ Sbjct: 315 PPTVAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.766e-17 Identity = 43/112 (38.39%), Postives = 61/112 (54.46%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P + A F Q++++ HP I GY PV H S IA + EL K+D +SG+ E+ P FLK GDA +E + P GRFA+RDM T+A G+ +V++K Sbjct: 311 PPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPKSGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.531e-17 Identity = 39/108 (36.11%), Postives = 60/108 (55.56%), Query Frame = -2 Query: 261 AANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 584 A F +QV+++ HP I GY PV CH + +A ++++ +D ++G E+ P F+K GDA +E + P GRFA+RDM QTVA GV+ ++ K Sbjct: 319 AVEFKAQVVVLQHPSAITAGYTPVFHCHTAQVACTLTQILATLDPKTGGVKEQNPPFIKTGDAAIVLIRPTRPLVIEKVKEIPQLGRFAIRDMGQTVAAGVVMDITPK 426 The following BLAST results are available for this feature:
BLAST of CN185835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185835 ID=CN185835; Name=CN185835; organism=Citrus sinensis; type=EST; length=597bpback to top |