CN185835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 9.836e-17 Identity = 41/105 (39.05%), Postives = 60/105 (57.14%), Query Frame = -2 Query: 261 FTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 575 FT+Q++++NHP I GY PV H + +A K E+V ++ + G L+ +P F+K GD +E S+ P GRFAVRDM QTVA G ++EK+ Sbjct: 320 FTAQIVVLNHPSVIAPGYKPVFHVHTAQVACKIDEIVRTLNPKDGTTLKDKPDFIKTGDIAIVKVIPDKPLVIEKVSEIPQLGRFAVRDMGQTVAAGQCIDLEKR 424
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.285e-16 Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = -2 Query: 264 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEK 596 P FT+Q++++NHP I GY PV H + +A + E+V I+ + G L+++P F+K GD +E S++P GRFA+RDM TVA G ++EK Sbjct: 313 PPTVVKGFTAQIVVLNHPSVIAAGYKPVFHVHTAQVACRIDEIVKTINPKDGTTLKEKPDFIKTGDIAIVKVVPDRALVIEKVSEFPQLGRFAIRDMGMTVAAGQCIDLEK 423
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.678e-16 Identity = 42/113 (37.17%), Postives = 63/113 (55.75%), Query Frame = -2 Query: 258 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 596 P A +FT+Q++++ HP + GY PV H + IA F+E+ K++ +G+ LE+ P FLK GDA +E+ + P GRFA+RDM TVA G+ V K+ Sbjct: 315 PPTVATDFTAQIVVLQHPSVLTVGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.881e-16 Identity = 39/110 (35.45%), Postives = 65/110 (59.09%), Query Frame = -2 Query: 267 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVE 596 P A F +++ ++ HP I GY PV+ H + ++ + E+ K+D ++G+ +E+ P+FLK GDA VE FS+ P GRFA+RDM +TV +G++ +V+ Sbjct: 319 PPTVAEEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQVVEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDVK 428
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METMA (Elongation factor 1-alpha OS=Methanosarcina mazei GN=tuf PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.375e-16 Identity = 41/112 (36.61%), Postives = 60/112 (53.57%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P + A F Q++++ HP I GY PV H S IA + L K+D ++G+ E+ P FLK GDA +E + P GRFA+RDM T+A G+ +V++K Sbjct: 311 PPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIALNKKLDPKTGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16 Identity = 40/112 (35.71%), Postives = 59/112 (52.68%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P A FT Q++++ HP I GY PV CH + A + K+D +SG+ E+ P ++K GDA +E S+ P GRFA+RDM T+A G+ +V +K Sbjct: 310 PPSVADEFTGQIVVLQHPSAITVGYTPVFHCHTAQTACTLMAINKKLDPKSGQVKEENPTYIKAGDAAIVTIKPTRPMCIEPVSEIPQLGRFAIRDMGMTIAAGMCMSVTQK 421
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METAC (Elongation factor 1-alpha OS=Methanosarcina acetivorans GN=tuf PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16 Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P + A F Q++++ HP I GY PV H S IA + L K+D ++G+ E+ P F+K GDA +E + P GRFA+RDM T+A G+ +V++K Sbjct: 311 PPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLISLDKKLDPKTGQVKEEHPTFIKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.087e-15 Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = -2 Query: 282 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGV 596 P A F +Q++++ HPG + GY PV H + +A F L K+D +G+ E+ P FLK GDA +E + P GRFA+RDM QTVA G+ Sbjct: 301 PPSVAKEFKAQIVVLQHPGVMTVGYTPVFHAHTAQVACTFLSLDVKLDPATGQPKEENPDFLKTGDAALVTIKPTKPMVIENIKEIPHMGRFAIRDMGQTVAAGM 405
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.087e-15 Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P A F +Q+++M HP I GY PV H + +A + KID SG+ E+ P F++NGDA +E S+ P G FA+RDM QT+A G + V ++ Sbjct: 310 PPSVAETFQAQIVVMQHPSVITEGYTPVFHAHTAQVACTVESIDKKIDPSSGEVAEENPDFIQNGDAAVVTVRPQKPLSIEPSSEIPELGSFAIRDMGQTIAAGKVLGVNER 421
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15 Identity = 38/110 (34.55%), Postives = 63/110 (57.27%), Query Frame = -2 Query: 267 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVE 596 P A +++ ++ HP IG GY PV+ H + + + EL++++D +G+ +E++P+F+K GD VE FSD P GRF++RDM +TVA G I ++ Sbjct: 327 PPTVAEEIVARIAVLEHPTTIGVGYTPVMHVHTATVPTQIIELISRLDPATGQTVEQKPQFIKRGDVAMVRLKPLKPVVVERFSDLPALGRFSLRDMGRTVAAGQIIEIK 436 The following BLAST results are available for this feature:
BLAST of CN185835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185835 ID=CN185835; Name=CN185835; organism=Citrus sinensis; type=EST; length=597bpback to top |