CN185831

Overview
NameCN185831
Unique NameCN185831
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length438
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_DESHY (ATP-dependent Clp protease proteolytic subunit 2 OS=Desulfitobacterium hafniense (strain Y51) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI++LG      V  L++A+ L+L+ ED EK I+LYINS G        G  +   AIYD M Y++  + T+CVG A      LL AGAKG
Sbjct:   27 KDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKDIFLYINSPG--------GSISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKG 111          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_BACSK (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus clausii (strain KSM-K16) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13
Identity = 42/93 (45.16%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ LG     +V   I+A+ L+LQ ED EK I LYINS G        G  T   AIYD M ++KP + T+C+G A      LL AGAKG
Sbjct:   26 KDRIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDISLYINSPG--------GSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLTAGAKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_PSEHT (ATP-dependent Clp protease proteolytic subunit OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=clpP PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.044e-13
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K RI++L      ++  LILA+ L+L+ E+ +K I+LYINS G        G  T   AIYD M ++KP + T+CVG A      LL AGAKG
Sbjct:   35 KERIIFLTGPVEDNMANLILAQMLFLESENPDKDIFLYINSPG--------GSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKG 119          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_ARCB4 (ATP-dependent Clp protease proteolytic subunit OS=Arcobacter butzleri (strain RM4018) GN=clpP PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.044e-13
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ L      +V   ++A+ L+L+ ED +K IYLYINS G        G  T   +I+D M Y+KP + T+C+G A      LL +GAKG
Sbjct:   26 KDRIIMLSGEINDAVASTVVAQLLFLEAEDPDKDIYLYINSPG--------GVVTSGMSIFDTMNYIKPDVCTICIGQAASMGAFLLSSGAKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP1_BACCR (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.044e-13
Identity = 41/93 (44.09%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ +G      V   ++A+ L+L+ ED EK IYLYINS G        G  T  FAI D M  +KP + TLC+G A     LLL +GAKG
Sbjct:   26 KDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIYLYINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_WOLSU (ATP-dependent Clp protease proteolytic subunit OS=Wolinella succinogenes GN=clpP PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13
Identity = 40/93 (43.01%), Postives = 50/93 (53.76%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ L       V   I+++ L+L+ ED EK IYLYINS G        G  T   +IYD M YVKP I T+C+G A      LL  G KG
Sbjct:   26 KDRIIMLSGEINDGVASSIVSQMLFLEAEDPEKDIYLYINSPG--------GVITSGMSIYDTMNYVKPDICTICIGQAASMGAFLLSCGTKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_NITSB (ATP-dependent Clp protease proteolytic subunit OS=Nitratiruptor sp. (strain SB155-2) GN=clpP PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13
Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ L      +V   I+A+ L+L+ ED +K IYLYINS G        G  T   +IYD M Y+KP + T+C+G A      LL +G KG
Sbjct:   27 KDRIIMLSGEINDAVASSIVAQLLFLEAEDPDKDIYLYINSPG--------GVITSGMSIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKG 111          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_DESDG (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio desulfuricans (strain G20) GN=clpP PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13
Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ LG     +V  LI A+ L+L+ E+ EK IYLYINS G        G  T   AIYD M Y+  P+ TLC+G A      LL AG  G
Sbjct:   25 KDRIILLGTPVDDNVASLICAQLLFLESENPEKEIYLYINSPG--------GVVTAGLAIYDTMQYISAPVATLCMGQAASMGAFLLAAGQPG 109          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CLOBM (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=clpP PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13
Identity = 41/93 (44.09%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ L      +   LI+A+ L+L+ ED +K I+LYINS G        G  T   AIYD M Y+KP + T+CVG A      LL AGAKG
Sbjct:   26 KDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDIHLYINSPG--------GSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLVAGAKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_BARBK (ATP-dependent Clp protease proteolytic subunit OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=clpP PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K RI+++      S+  L+ A+ L+L+ E+ +K I LYINS G        G  T   AIYD M +++PPI TLC+G A    +LLL AGAKG
Sbjct:   34 KERIIFINGPVEDSMAMLVCAQLLFLEAENPKKEISLYINSPG--------GVVTSGMAIYDTMQFIRPPISTLCMGQAASMGSLLLTAGAKG 118          
The following BLAST results are available for this feature:
BLAST of CN185831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 408
Match NameE-valueIdentityDescription
CLPP2_DESHY3.096e-1343.01ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP2_BACSK3.096e-1345.16ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_PSEHT4.044e-1343.01ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_ARCB44.044e-1339.78ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_BACCR4.044e-1344.09ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_WOLSU5.281e-1343.01ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_NITSB5.281e-1340.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_DESDG5.281e-1344.09ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOBM5.281e-1344.09ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_BARBK5.281e-1343.01ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185831 ID=CN185831; Name=CN185831; organism=Citrus sinensis; type=EST; length=438bp
ATTCCGACTTCTCCGGGCTCAGGCTCCGACCCGATTGCCTCAATCCGGAT
TCATTCTGCAAGTCCAAACCTAGGAGCCCCGTCATCACCATGGTCATTCC
TTTTACTAGTGGAACTGCATGGGAGCAACCTCCACCAGACTTGGCATCGG
TATTGGTACAAGAATCGAATTGTTTACTTGGGCATGTCTTTTGTTCCTTC
TGTCACAGAGCTGATTCTTGCTGAGTTCCTTTACCTGCAGTATGAAGATG
TTGAGAAGCCCATTTACTTATACATAAACTCTACGGGAACAACCAAGGGT
GGCGAGAAGTTGGGTTATGAAACTGAGGCTTTTGCGATATATGATGTTAT
GGGTTATGTCAAGCCGCCTATATTTACTCTTTGTGTCGGCAATGCTTGGG
GTGAGGCAACGCTTCTCTTGGGTGCCGGTGCCAAAGGA
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