CN185831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_PROM9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=clpP2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.281e-13 Identity = 47/126 (37.30%), Postives = 63/126 (50.00%), Query Frame = 1 Query: 70 LGAPSSPWSFLLLVELHGSNLHQTWHRYWYK---NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 +G PS P+ L GS ++ W + + RI++LG + ++A+ LYL +D KPIYLYINS G G T AIYD + YVK + T+CVG A LL AG KG Sbjct: 3 IGTPSVPY------RLPGSQ-YERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNSKPIYLYINSPG--------GSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLAAGTKG 113
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CYAP8 (ATP-dependent Clp protease proteolytic subunit OS=Cyanothece sp. (strain PCC 8801) GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.898e-13 Identity = 48/126 (38.10%), Postives = 61/126 (48.41%), Query Frame = 1 Query: 70 LGAPSSPWSFLLLVELHGSNLHQTWHRYWYK---NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 LG PS P+ L GS ++ W + + RI++LG + I+A LYL ED KPIYLYINS G G T AIYD M Y+K + T+CVG A LL +G G Sbjct: 3 LGVPSVPY------RLPGSQ-YERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPGKPIYLYINSPG--------GSVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPG 113
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTE (ATP-dependent Clp protease proteolytic subunit OS=Clostridium tetani GN=clpP PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.898e-13 Identity = 40/93 (43.01%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI+ L LI+A+ L+L+ ED +K I+LYINS G G T AIYD M Y+KP + T+C+G A LL AGAKG Sbjct: 26 KDRIIMLSDQVNDVTASLIVAQLLFLEAEDPDKDIFLYINSPG--------GSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_BARQU (ATP-dependent Clp protease proteolytic subunit OS=Bartonella quintana GN=clpP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.898e-13 Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K RI+++ S+ L+ A+ L+L+ E+ +K I LYINS G G T AIYD M +++PP+ TLC+G A +LLL AGAKG Sbjct: 34 KERIIFINGPVEDSMAMLVCAQLLFLEAENPKKEISLYINSPG--------GVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKG 118
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.898e-13 Identity = 40/94 (42.55%), Postives = 50/94 (53.19%), Query Frame = 1 Query: 157 YKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 Y+ RI++LG + I+A LYL ED K IYLYINS G G T AIYD M ++K + T+CVG A + LL AG KG Sbjct: 28 YRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG--------GMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKG 113
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJB (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. GN=clpP2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.898e-13 Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 ++RI++LG + LI+A+ LYL+ ED EK IYLYINS G G AIYD M +++P + T+C+G A LL G KG Sbjct: 24 RDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG--------GSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKG 108
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.898e-13 Identity = 40/94 (42.55%), Postives = 50/94 (53.19%), Query Frame = 1 Query: 157 YKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 Y+ RI++LG + I+A LYL ED K IYLYINS G G T AIYD M ++K + T+CVG A + LL AG KG Sbjct: 28 YRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPG--------GMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKG 113
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_NEOSM (ATP-dependent Clp protease proteolytic subunit OS=Neorickettsia sennetsu (strain Miyayama) GN=clpP PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 9.009e-13 Identity = 37/93 (39.78%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K R+V+L + LI+A+ L+L+ E+ +K I++YINS G G T +IYD M Y+KP + T+CVG A A+L+L +GA+G Sbjct: 26 KERVVFLTGPIEDGMASLIVAQLLFLEAENPDKDIFMYINSPG--------GVVTAGLSIYDTMQYIKPSVSTVCVGQAASAASLILASGAEG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_GEOTN (ATP-dependent Clp protease proteolytic subunit OS=Geobacillus thermodenitrificans (strain NG80-2) GN=clpP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 9.009e-13 Identity = 40/93 (43.01%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI++LG V I+++ L+L ED EK I LYINS G G T AIYD M ++KP + T+C+G A LL AGAKG Sbjct: 26 KDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDISLYINSPG--------GSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_BUCAI (ATP-dependent Clp protease proteolytic subunit OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=clpP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 9.009e-13 Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 1 Query: 103 LLVELH--GSNLHQTWHRYWYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 ++VE H G + + R K RI+++ + ++ I+A+ L+L+ E+ EK I+LYINS G G T +IYD M +VKP I T+C+G A A LLL +GAKG Sbjct: 20 MVVEQHSRGERSYDIYSRL-LKERIIFITGAIEDNMANNIVAQILFLEAENPEKDIFLYINSPG--------GIITSGMSIYDTMQFVKPEISTICLGQACSMAALLLTSGAKG 124 The following BLAST results are available for this feature:
BLAST of CN185831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185831 ID=CN185831; Name=CN185831; organism=Citrus sinensis; type=EST; length=438bpback to top |