CN185831

Overview
NameCN185831
Unique NameCN185831
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length438
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP1_BACHK (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus thuringiensis subsp. konkukian GN=clpP1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.009e-13
Identity = 41/93 (44.09%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RIV +G      V   ++A+ L+L+ ED EK I+LYINS G        G  T  FAI D M  +KP + TLC+G A     LLL +GAKG
Sbjct:   26 KDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP1_BACAN (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus anthracis GN=clpP1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.009e-13
Identity = 41/93 (44.09%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RIV +G      V   ++A+ L+L+ ED EK I+LYINS G        G  T  FAI D M  +KP + TLC+G A     LLL +GAKG
Sbjct:   26 KDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPG--------GSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP1_ANASP (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.009e-13
Identity = 39/93 (41.94%), Postives = 52/93 (55.91%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            + RIV+LG     ++  LI+A+ L+L  ED EK IYLYINS G        G  T    I+D M +++P + T+C G A      LL AGAKG
Sbjct:   25 RERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPG--------GSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKG 109          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_RICRS (ATP-dependent Clp protease proteolytic subunit OS=Rickettsia rickettsii (strain Sheila Smith) GN=clpP PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K RI+++  +    +  LI+A+ L+L+ E+ +K IY+YINS G        G  T   AIYD M Y+KP + TLC+G A    +LLL  G KG
Sbjct:   26 KERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPG--------GVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_RICPU (ATP-dependent Clp protease proteolytic subunit OS=Rickettsia peacockii (strain Rustic) GN=clpP PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K RI+++  +    +  LI+A+ L+L+ E+ +K IY+YINS G        G  T   AIYD M Y+KP + TLC+G A    +LLL  G KG
Sbjct:   26 KERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPG--------GVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_RICCN (ATP-dependent Clp protease proteolytic subunit OS=Rickettsia conorii GN=clpP PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K RI+++  +    +  LI+A+ L+L+ E+ +K IY+YINS G        G  T   AIYD M Y+KP + TLC+G A    +LLL  G KG
Sbjct:   26 KERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPG--------GVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_PELLD (ATP-dependent Clp protease proteolytic subunit OS=Pelodictyon luteolum (strain DSM 273) GN=clpP PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 36/93 (38.71%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            + RI++LG      V  LI+A+ ++L+ ED E+ IY+Y+NS G        G  +    IYD M Y++P + T+CVG A      LL +GAKG
Sbjct:   51 RERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPG--------GSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKG 135          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CAMJR (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter jejuni (strain RM1221) GN=clpP PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ L       +   I+A+ L+L+ ED  K IYLYINS G        G  T  F+IYD M Y+KP + T+C+G A      LL  GA+G
Sbjct:   25 KDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEG 109          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CAMJJ (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=clpP PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ L       +   I+A+ L+L+ ED  K IYLYINS G        G  T  F+IYD M Y+KP + T+C+G A      LL  GA+G
Sbjct:   25 KDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEG 109          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CAMJE (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter jejuni GN=clpP PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 1.177e-12
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RI+ L       +   I+A+ L+L+ ED  K IYLYINS G        G  T  F+IYD M Y+KP + T+C+G A      LL  GA+G
Sbjct:   25 KDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPG--------GVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEG 109          
The following BLAST results are available for this feature:
BLAST of CN185831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 408
Match NameE-valueIdentityDescription
CLPP1_BACHK9.009e-1344.09ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_BACAN9.009e-1344.09ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_ANASP9.009e-1341.94ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_RICRS1.177e-1240.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_RICPU1.177e-1240.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_RICCN1.177e-1240.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_PELLD1.177e-1238.71ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CAMJR1.177e-1240.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CAMJJ1.177e-1240.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CAMJE1.177e-1240.86ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185831 ID=CN185831; Name=CN185831; organism=Citrus sinensis; type=EST; length=438bp
ATTCCGACTTCTCCGGGCTCAGGCTCCGACCCGATTGCCTCAATCCGGAT
TCATTCTGCAAGTCCAAACCTAGGAGCCCCGTCATCACCATGGTCATTCC
TTTTACTAGTGGAACTGCATGGGAGCAACCTCCACCAGACTTGGCATCGG
TATTGGTACAAGAATCGAATTGTTTACTTGGGCATGTCTTTTGTTCCTTC
TGTCACAGAGCTGATTCTTGCTGAGTTCCTTTACCTGCAGTATGAAGATG
TTGAGAAGCCCATTTACTTATACATAAACTCTACGGGAACAACCAAGGGT
GGCGAGAAGTTGGGTTATGAAACTGAGGCTTTTGCGATATATGATGTTAT
GGGTTATGTCAAGCCGCCTATATTTACTCTTTGTGTCGGCAATGCTTGGG
GTGAGGCAACGCTTCTCTTGGGTGCCGGTGCCAAAGGA
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