CN185831

Overview
NameCN185831
Unique NameCN185831
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length438
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CLOK5 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=clpP PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11
Identity = 38/93 (40.86%), Postives = 49/93 (52.69%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RIV L          LI+A+ L+L+ E+ +K IY YINS G        G  T   AIYD M Y+K  + T+C+G A      LL AG KG
Sbjct:   26 KDRIVMLSEEVNDVTASLIVAQLLFLEAENPDKDIYFYINSPG--------GSITAGMAIYDTMQYIKSDVSTICIGMAASMGAFLLAAGEKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CLOK1 (ATP-dependent Clp protease proteolytic subunit OS=Clostridium kluyveri (strain NBRC 12016) GN=clpP PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11
Identity = 38/93 (40.86%), Postives = 49/93 (52.69%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K+RIV L          LI+A+ L+L+ E+ +K IY YINS G        G  T   AIYD M Y+K  + T+C+G A      LL AG KG
Sbjct:   26 KDRIVMLSEEVNDVTASLIVAQLLFLEAENPDKDIYFYINSPG--------GSITAGMAIYDTMQYIKSDVSTICIGMAASMGAFLLAAGEKG 110          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_AZOC5 (ATP-dependent Clp protease proteolytic subunit OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=clpP PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11
Identity = 36/93 (38.71%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K RI++L       ++ L +A+ L+L+ E+ +K I +YINS G        G  T   AIYD M +++P + TLC+G A    +LLL AG KG
Sbjct:   35 KERIIFLTGPVEDGMSTLAVAQLLFLEAENPKKEISMYINSPG--------GVVTSGLAIYDTMQFIRPAVSTLCIGQAASMGSLLLTAGEKG 119          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP3_PROMM (ATP-dependent Clp protease proteolytic subunit 3 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11
Identity = 38/93 (40.86%), Postives = 50/93 (53.76%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            + RI++LG          I+A+ L+L+ ED EK IYLYINS G        G   +   I+D M +VKP + T+CVG A      LL AGA G
Sbjct:   24 RERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYINSPG--------GSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMG 108          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP3_FRASC (ATP-dependent Clp protease proteolytic subunit 3 OS=Frankia sp. (strain CcI3) GN=clpP3 PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11
Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K RIV+LG+         ++A+ L+L+ ED ++ I +YINS G        G  T   AIYD M +V+P I T+C+G A   A +LL AG  G
Sbjct:   35 KERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISIYINSPG--------GSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPG 119          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_FRASC (ATP-dependent Clp protease proteolytic subunit 2 OS=Frankia sp. (strain CcI3) GN=clpP2 PE=3 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11
Identity = 37/93 (39.78%), Postives = 52/93 (55.91%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            K RIV+LG+         ++A+ L+L+ ED ++ I +YINS G        G  T   AIYD M +V+P I T+C+G A   A +LL AG  G
Sbjct:   41 KERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISIYINSPG--------GSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPG 125          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP1_RHIL3 (ATP-dependent Clp protease proteolytic subunit 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            + RI++L      +V+ L+ A+ L+L+ E+ +KPI LYINS G        G  T   A+YD M +++ P+ TLC+G A    + LL AG  G
Sbjct:   30 RERIIFLNGEVNDTVSALVCAQLLFLEAENSKKPINLYINSPG--------GVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEAG 114          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMT (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11
Identity = 38/93 (40.86%), Postives = 51/93 (54.84%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438
            + RIV+LG          I+A+ L+L+ +D +K I+LYINS G        G   +   I+D M +VKP I T+CVG A      LL AGAKG
Sbjct:   24 RERIVFLGEPVTSDSANRIVAQLLFLEADDPDKDIFLYINSPG--------GSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLCAGAKG 108          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP1_MESSB (ATP-dependent Clp protease proteolytic subunit 1 OS=Mesorhizobium sp. (strain BNC1) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.456e-11
Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAK 435
            K RI+++       +  L+ A+ L+L+ E+ +K I LYINS G        G  T   AIYD M +++PP+ TLC+G A    +LLL AG K
Sbjct:   34 KERIIFITGPVEDGMATLVCAQLLFLEAENPKKEIALYINSPG--------GVVTSGMAIYDTMQFIQPPVSTLCIGQAASMGSLLLCAGHK 117          
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_NITHX (ATP-dependent Clp protease proteolytic subunit OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=clpP PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.432e-11
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 1
Query:  160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAK 435
            K RI+++      +++ L++A+ L+L+ ++ +K I +YINS G        G  T   AIYD M +++PP+ TLC G A    +LLL AG K
Sbjct:   34 KERIIFVTGPVEDNMSMLVVAQLLFLEADNPKKEISMYINSPG--------GVVTSGLAIYDTMQFIRPPVATLCTGQAASMGSLLLAAGEK 117          
The following BLAST results are available for this feature:
BLAST of CN185831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 408
Match NameE-valueIdentityDescription
CLPP_CLOK56.456e-1140.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CLOK16.456e-1140.86ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_AZOC56.456e-1138.71ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_PROMM6.456e-1140.86ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP3_FRASC6.456e-1139.78ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_FRASC6.456e-1139.78ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP1_RHIL36.456e-1137.63ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_PROMT6.456e-1140.86ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP1_MESSB6.456e-1139.13ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_NITHX8.432e-1136.96ATP-dependent Clp protease proteolytic subunit OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185831 ID=CN185831; Name=CN185831; organism=Citrus sinensis; type=EST; length=438bp
ATTCCGACTTCTCCGGGCTCAGGCTCCGACCCGATTGCCTCAATCCGGAT
TCATTCTGCAAGTCCAAACCTAGGAGCCCCGTCATCACCATGGTCATTCC
TTTTACTAGTGGAACTGCATGGGAGCAACCTCCACCAGACTTGGCATCGG
TATTGGTACAAGAATCGAATTGTTTACTTGGGCATGTCTTTTGTTCCTTC
TGTCACAGAGCTGATTCTTGCTGAGTTCCTTTACCTGCAGTATGAAGATG
TTGAGAAGCCCATTTACTTATACATAAACTCTACGGGAACAACCAAGGGT
GGCGAGAAGTTGGGTTATGAAACTGAGGCTTTTGCGATATATGATGTTAT
GGGTTATGTCAAGCCGCCTATATTTACTCTTTGTGTCGGCAATGCTTGGG
GTGAGGCAACGCTTCTCTTGGGTGCCGGTGCCAAAGGA
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