CN185831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_DESVM (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=clpP PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 43/93 (46.24%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI+ LG V LI A+ L+L+ E+ EK IYLYINS G G T AIYD M Y+ P+ TLC+G A LLL AGA G Sbjct: 25 KDRIILLGTPIDDQVASLICAQLLFLESENPEKEIYLYINSPG--------GSVTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGAPG 109
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_AQUAE (ATP-dependent Clp protease proteolytic subunit OS=Aquifex aeolicus GN=clpP PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 ++RIV LG V LI+A+ L+L+ +D +K IYLYINS G G T AIYD M Y+KP + T+C+G A +LL AGA G Sbjct: 33 QDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDIYLYINSPG--------GSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPG 117
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_ACTPJ (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=clpP PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K RI++L + LI+A+ L+L+ ED EK IYLYINS G G T AIYD M ++KP + TLC G A LL GAKG Sbjct: 26 KERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_ACTP7 (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=clpP PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K RI++L + LI+A+ L+L+ ED EK IYLYINS G G T AIYD M ++KP + TLC G A LL GAKG Sbjct: 26 KERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_ACTP2 (ATP-dependent Clp protease proteolytic subunit OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=clpP PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K RI++L + LI+A+ L+L+ ED EK IYLYINS G G T AIYD M ++KP + TLC G A LL GAKG Sbjct: 26 KERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMM (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=clpP2 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 50/126 (39.68%), Postives = 63/126 (50.00%), Query Frame = 1 Query: 70 LGAPSSPWSFLLLVELHGSNLHQTWHRYWYK---NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 +G PS P+ L GS + + W + + RI++LG V ++A+ LYL ED KPIYLYINS G G T AIYD M YVK + T+CVG A LL AG KG Sbjct: 3 IGTPSVPY------RLPGSQMER-WVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDSTKPIYLYINSPG--------GSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKG 113
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_BACHD (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus halodurans GN=clpP2 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RIV+LG + + I+A+ L+L+ E+ +K IYLYINS G G + FAIYD M +VKP I T+C G A A +LL AG KG Sbjct: 27 KDRIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPG--------GSTSAGFAIYDTMQFVKPSIHTICTGMAASFAAILLLAGTKG 111
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP1_MYXXD (ATP-dependent Clp protease proteolytic subunit 1 OS=Myxococcus xanthus (strain DK 1622) GN=clpP1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.148e-14 Identity = 48/120 (40.00%), Postives = 63/120 (52.50%), Query Frame = 1 Query: 79 PSSPWSFLLLVELHGSNLHQTWHRYWYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 P P +++ G + + R K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G T AIYD M YVK P+ T+CVG A +LL AGAKG Sbjct: 2 PFMPVPYVIEQTHRGERSYDIYSRL-LKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKG 112
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXD (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus (strain DK 1622) GN=clpP2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.064e-13 Identity = 44/93 (47.31%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI+ LG V +I+A+ L+L+ ED +K I LYINS G G T AIYD M YVK P+ T+CVG A LLL AGAKG Sbjct: 25 KDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKG 109
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXA (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus GN=clpP2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.064e-13 Identity = 44/93 (47.31%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RIV LG V +I+A+ L+L+ ED +K I LYINS G G T AIYD M YVK P+ T+CVG A +LL AGAKG Sbjct: 28 KDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPG--------GSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKG 112 The following BLAST results are available for this feature:
BLAST of CN185831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185831 ID=CN185831; Name=CN185831; organism=Citrus sinensis; type=EST; length=438bpback to top |