CN185831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP1_BACHD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus halodurans GN=clpP1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.064e-13 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI+ LG + +V I+A+ L+LQ ED +K I LYINS G G T AIYD M Y+KP + T+C+G A LL AGAKG Sbjct: 26 KDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPG--------GSITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_MOOTA (ATP-dependent Clp protease proteolytic subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=clpP PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.390e-13 Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI++LG + V L++A+ L+L+ ED +K I+LYINS G G + AI+D M Y++P + T+CVG A LL AGAKG Sbjct: 27 KDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKDIHLYINSPG--------GSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKG 111
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_DESMR (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=clpP PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.390e-13 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 ++RI+ LG + V LI A+ L+L+ ED EK I++YINS G G + AIYD M YV PP+ TLC+G A LLL AGA G Sbjct: 26 RDRIILLGSAVDDYVANLICAQLLFLESEDPEKEIFMYINSPG--------GVVSAGLAIYDTMQYVMPPVSTLCLGQAASMGALLLCAGATG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMT (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.390e-13 Identity = 49/126 (38.89%), Postives = 62/126 (49.21%), Query Frame = 1 Query: 70 LGAPSSPWSFLLLVELHGSNLHQTWHRYWYK---NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 +G PS P+ L GS + W + + RI++LG + ++A+ LYL ED KPIYLYINS G G T AIYD M YVK + T+CVG A LL AG KG Sbjct: 3 IGTPSVPY------RLPGSQFER-WVDIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPG--------GSVTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKG 113
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMP (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpP2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.390e-13 Identity = 48/126 (38.10%), Postives = 64/126 (50.79%), Query Frame = 1 Query: 70 LGAPSSPWSFLLLVELHGSNLHQTWHRYWYK---NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 +G PS P+ L GS ++ W + + RI++LG + ++A+ LYL +D KPIYLYINS G G T AIYD + YVK + T+CVG A LLGAG KG Sbjct: 3 IGTPSVPY------RLPGSQ-YERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNTKPIYLYINSPG--------GSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKG 113
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_ARATH (ATP-dependent Clp protease proteolytic subunit 2, mitochondrial OS=Arabidopsis thaliana GN=CLPP2 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.390e-13 Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K RI+ + + +++A+ LYL+ E+ KPI++Y+NS G G+ T AIYD M Y++ PI T+C+G A A+LLL AGAKG Sbjct: 55 KERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPG--------GHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKG 139
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_HAEDU (ATP-dependent Clp protease proteolytic subunit OS=Haemophilus ducreyi GN=clpP PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.815e-13 Identity = 40/93 (43.01%), Postives = 50/93 (53.76%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K RI++L + LI+A+ L+L+ ED EK IYLYINS G G T AIYD M ++KP + TLC G A LL G KG Sbjct: 26 KERIIFLNGEVEDHMANLIVAQLLFLEAEDPEKDIYLYINSPG--------GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGKKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CAMHC (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=clpP PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.815e-13 Identity = 39/93 (41.94%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RIV L V ++A+ L+L+ ED +K IYLYINS G G T F+IYD M Y+KP + T+C+G A LL G KG Sbjct: 25 KDRIVMLSGEINDEVASSVVAQLLFLEAEDPDKDIYLYINSPG--------GVVTSGFSIYDTMNYIKPAVSTICIGQAASMGAFLLSCGEKG 109
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_SULDN (ATP-dependent Clp protease proteolytic subunit OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=clpP PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.371e-13 Identity = 40/93 (43.01%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI+ L +V I+A+ L+L+ ED EK IY YINS G G T AIYD M Y++P + T+CVG A LL +GAKG Sbjct: 26 KDRIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDIYFYINSPG--------GVVTAGMAIYDTMNYIRPDVATICVGQAASMGAFLLSSGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_LAWIP (ATP-dependent Clp protease proteolytic subunit OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=clpP PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.371e-13 Identity = 42/92 (45.65%), Postives = 51/92 (55.43%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAK 435 K+RIV LG V LI A+ L+L+ +D EK IYLYINS G G T AIYD M Y+ P + T+C+G A LLL AG K Sbjct: 31 KDRIVLLGTEVNDQVASLICAQLLFLESQDPEKEIYLYINSPG--------GSVTAGLAIYDTMNYITPNVATVCMGRAASMGALLLAAGEK 114 The following BLAST results are available for this feature:
BLAST of CN185831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185831 ID=CN185831; Name=CN185831; organism=Citrus sinensis; type=EST; length=438bpback to top |