CN185831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.371e-13 Identity = 39/93 (41.94%), Postives = 53/93 (56.99%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 ++RI++LG + LI+A+ LYL+ ED EK IYLYINS G G AIYD M +++P + T+C+G A LL GAKG Sbjct: 24 RDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPG--------GSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKG 108
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP2_PROMA (ATP-dependent Clp protease proteolytic subunit 2 OS=Prochlorococcus marinus GN=clpP2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.371e-13 Identity = 49/125 (39.20%), Postives = 61/125 (48.80%), Query Frame = 1 Query: 70 LGAPSSPWSFLLLVELHGSNLHQTWHRYWYK---NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAK 435 +G PS P+ L GS + W + + RI++LG V ++A+ LYL ED KPIYLYINS G G T AIYD M YVK + T+CVG A LL AG K Sbjct: 3 IGTPSVPY------RLPGSQFER-WVDIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDSTKPIYLYINSPG--------GSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTK 112
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_SYNWW (ATP-dependent Clp protease proteolytic subunit OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI++LG +V L++A+ L+L+ ED +K I LYINS G G T AIYD + Y++P + T+CVG A LL AG KG Sbjct: 27 KDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDISLYINSPG--------GSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKG 111
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_DESVV (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 42/93 (45.16%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RIV LG V LI A+ L+L+ E+ EK I++YINS G G T AIYD M Y+ P+ TLC+G A LLL AGA G Sbjct: 25 KDRIVLLGTPIDDQVASLICAQLLFLESENPEKEIHMYINSPG--------GSVTAGMAIYDTMQYINSPVSTLCMGQAASMGALLLAAGAPG 109
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_DESVH (ATP-dependent Clp protease proteolytic subunit OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 42/93 (45.16%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RIV LG V LI A+ L+L+ E+ EK I++YINS G G T AIYD M Y+ P+ TLC+G A LLL AGA G Sbjct: 25 KDRIVLLGTPIDDQVASLICAQLLFLESENPEKEIHMYINSPG--------GSVTAGMAIYDTMQYINSPVSTLCMGQAASMGALLLAAGAPG 109
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_CLOTH (ATP-dependent Clp protease proteolytic subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 41/93 (44.09%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 160 KNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 K+RI+ L L++A+ L+L+ ED +K I LYINS G G T FAIYD M YVKP + T+C+G A LL AGAKG Sbjct: 26 KDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDIQLYINSPG--------GSVTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKG 110
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_ANASK (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter sp. (strain K) GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 44/120 (36.67%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 79 PSSPWSFLLLVELHGSNLHQTWHRYWYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 P P +++ G + + R K+RI++LG V +I+A+ L+L+ ED +K I LYINS G G T AIYD M YVKP + T+C+G A LL GA G Sbjct: 2 PYIPMPYVVEQTHRGERSYDIYSRL-LKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPG--------GSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAG 112
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_ANADE (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 44/120 (36.67%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 79 PSSPWSFLLLVELHGSNLHQTWHRYWYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 P P +++ G + + R K+RI++LG V +I+A+ L+L+ ED +K I LYINS G G T AIYD M YVKP + T+C+G A LL GA G Sbjct: 2 PYIPMPYVVEQTHRGERSYDIYSRL-LKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPG--------GSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAG 112
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP_ANAD2 (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=clpP PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 44/120 (36.67%), Postives = 61/120 (50.83%), Query Frame = 1 Query: 79 PSSPWSFLLLVELHGSNLHQTWHRYWYKNRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 P P +++ G + + R K+RI++LG V +I+A+ L+L+ ED +K I LYINS G G T AIYD M YVKP + T+C+G A LL GA G Sbjct: 2 PYIPMPYVVEQTHRGERSYDIYSRL-LKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDKDINLYINSPG--------GSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAG 112
BLAST of CN185831 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNY3 (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Synechocystis sp. (strain PCC 6803) GN=clpP3 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.096e-13 Identity = 48/126 (38.10%), Postives = 63/126 (50.00%), Query Frame = 1 Query: 70 LGAPSSPWSFLLLVELHGSNLHQTWHRYWYK---NRIVYLGMSFVPSVTELILAEFLYLQYEDVEKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMGYVKPPIFTLCVGNAWGEATLLLGAGAKG 438 +G PS P+ L GS ++ W + + RI++LG S+ I+A LYL +D KPIYLYINS G G T AIYD M Y+K + T+CVG A LL +GA G Sbjct: 3 IGVPSVPF------RLPGSQ-YERWIDIYTRLSQERIIFLGQEVNDSIANRIVAFLLYLDSDDPSKPIYLYINSPG--------GSVTAGMAIYDTMQYIKAEVITICVGLAASMGAFLLASGAPG 113 The following BLAST results are available for this feature:
BLAST of CN185831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185831 ID=CN185831; Name=CN185831; organism=Citrus sinensis; type=EST; length=438bpback to top |