CN185830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.508e-36 Identity = 77/169 (45.56%), Postives = 106/169 (62.72%), Query Frame = -3 Query: 313 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM------ASQPASNNARPPTVQIRGQPVNQKSGC 801 +ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ +N +LVGNKCDL +VV E + AD++G F E SAK NV+Q F + I ++M +S P SN P + P Q S C Sbjct: 52 VSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP---ALGDTPPPQPSSC 217
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.275e-36 Identity = 75/168 (44.64%), Postives = 110/168 (65.48%), Query Frame = -3 Query: 310 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA----SQPASNNARPPTVQIRGQPVNQKSGCC 801 +ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +V+S E + +++G F ETSAK NV+Q F + I ++M+ + PA A+ T P Q + C Sbjct: 60 VSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPPPPQPNCAC 227
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.275e-36 Identity = 82/173 (47.40%), Postives = 109/173 (63.01%), Query Frame = -3 Query: 307 TIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQ--PASNN--------ARPPTVQIRGQPVNQKSGCCS 795 TIGV+F R + D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +LVGNKCDL+ + VSYE + FA E G+ FME SAK+A NVE+AF+ A +I ++ SN A P G +Q GCCS Sbjct: 38 TIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSNESYGIKVGYAIPGQSGGAGSSSSQGGGCCS 210
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 5.586e-36 Identity = 77/169 (45.56%), Postives = 106/169 (62.72%), Query Frame = -3 Query: 313 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM------ASQPASNNARPPTVQIRGQPVNQKSGC 801 +ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ +N +LVGNKCDL +VVS E + A ++G F E SAK NV+Q F + I ++M +S P SN P + P Q S C Sbjct: 52 VSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESLEPSSSPGSNGKGP---ALGDTPPPQPSSC 217
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 5.586e-36 Identity = 74/167 (44.31%), Postives = 112/167 (67.07%), Query Frame = -3 Query: 313 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA----SQPASNNARPPTVQIRGQPVNQKSGC 801 +ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +LVGNKCD+ +V+S E + +++G F ETSAK NV+Q F + I ++M+ + PA A+ T +++ P + C Sbjct: 60 VSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNT-RLKETPPPPQPNC 225
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.586e-36 Identity = 68/141 (48.23%), Postives = 101/141 (71.63%), Query Frame = -3 Query: 379 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMASQPA 801 IST+G+DF+ + V+ DG +KLQIWDTAGQERFR++T +YYR AH ++++YDVT++ SF++++ WL EI +A ++V +L+GNK D + V E A+ A + G+PFMETSAK+ NV+ AF A+A +K R P+ Sbjct: 94 ISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKELKQRHTKAPS 234
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.296e-36 Identity = 74/167 (44.31%), Postives = 111/167 (66.47%), Query Frame = -3 Query: 313 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA----SQPASNNARPPTVQIRGQPVNQKSGC 801 +ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +L GNKCD+ +VVS E + +++G F ETSAK NV+Q F + I ++M+ + PA A+ T +++ P + C Sbjct: 60 VSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST-RLKETPPPPQPNC 225
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.296e-36 Identity = 74/167 (44.31%), Postives = 111/167 (66.47%), Query Frame = -3 Query: 313 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRMA----SQPASNNARPPTVQIRGQPVNQKSGC 801 +ST+G+DFK++TV ++ K IKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N +L GNKCD+ +VVS E + +++G F ETSAK NV+Q F + I ++M+ + PA A+ T +++ P + C Sbjct: 60 VSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQST-RLKETPPPPQPNC 225
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.529e-36 Identity = 76/168 (45.24%), Postives = 105/168 (62.50%), Query Frame = -3 Query: 313 ISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM-----ASQPASNNARPPTVQIRGQPVNQKSGC 801 +ST+G+DFK++TV + K IKLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF V+ W +I Y+ +N +LVGNKCDL +VV E + AD++G F E SAK NV+Q F + I +M S + +N + P V P Q S C Sbjct: 52 VSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSSSGSNGKGPAV--GDAPAPQPSSC 217
BLAST of CN185830 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.529e-36 Identity = 72/134 (53.73%), Postives = 98/134 (73.13%), Query Frame = -3 Query: 394 TIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAASIKNRM 795 TIGV+F R + D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +LVGNKCDL+ + VSYE + FA E G+ FME SAK+A NVE+AF+ A +I ++ Sbjct: 38 TIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKI 171 The following BLAST results are available for this feature:
BLAST of CN185830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185830 ID=CN185830; Name=CN185830; organism=Citrus sinensis; type=EST; length=803bpback to top |