DC900045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_EMENI (Mitochondrial Rho GTPase 1 OS=Emericella nidulans GN=gem1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.079e-25 Identity = 68/190 (35.79%), Postives = 101/190 (53.16%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDP------AAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 ++ P S EL+ E F +F L D DNDG + AEL LF P P W + + G++TL+G++++W++ T P+ +L L Y+G+ AAL+VTR R ++ + RNV + G +GKSALL++FL R FS Y PT + AVN V+ PGG + LI+ E+ E Sbjct: 295 EVPPFASAELSPEGYRFFVNLFLLSDKDNDGGLNDAELASLFAPTPGLPPSWADGSFPSCTVRNEAGHVTLQGWLAQWSMTTFTSPKTTLEYLAYLGFESSDRSNPSTTAALKVTRPRKRRKRPGRVGRNVVLGHIVGAPGSGKSALLDAFLSRGFSTTYHPTIQPRTAVNTVELPGGKQCYLIMDELGE 484
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO2_HUMAN (Mitochondrial Rho GTPase 2 OS=Homo sapiens GN=RHOT2 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.101e-25 Identity = 69/186 (37.10%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 17 PDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGG----DPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEEGV 562 P S EL +F++ +F +D D DGA+ P EL+ LF P +PW P T G L L G++ +W L+T LD R L +L Y+GY D A A+ VTR++ +D++K QT+R+V C + G + GKSA L +FL R YA++ V Q G +K LIL E+ +G+ Sbjct: 295 PGCSTELNHLGYQFVQRVFEKHDQDRDGALSPVELQSLFSVFPAAPW--GPELPRTVRTEAGRLPLHGYLCQWTLVTYLDVRSCLGHLGYLGYPTLCEQDQAHAITVTREKRLDQEKGQTQRSVLLCKVVGARGVGKSAFLQAFLGRGLGHQDTREQPPGYAIDTV-QVNGQEKYLILCEVGTDGL 477
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_CANAL (Mitochondrial Rho GTPase 1 OS=Candida albicans GN=GEM1 PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.101e-25 Identity = 67/190 (35.26%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 11 LSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-GDPAAALRVTRKRSVDRKKQQT------ERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 ++P SVEL+ +F +F +D DNDG + EL LF + P P W E+ + + G +TL+G++++W L T L + +L L Y+G+ G+ AL+VT+ R + +K +T +RNVF C + G AGKS+LL SFL +S+ Y+PT + V ++ GG + LIL+E+ E Sbjct: 305 VNPHSSVELSPTGYKFFVDLFIKFDKDNDGGLNEDELNTLFRSTPGIPKLWVESNFPSSIVCNEEGYVTLQGWLAQWNLTTFLSYKTTLEYLAYLGFDEGNSTKALKVTKPRKIRQKNGKTYRNAVNDRNVFNCFIVGAPKAGKSSLLESFLHGSYSDIYSPTIQPRLVVKDIELRGGKQCYLILEELGE 494
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO_DROME (Mitochondrial Rho GTPase OS=Drosophila melanogaster GN=Miro PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.995e-25 Identity = 67/193 (34.72%), Postives = 105/193 (54.40%), Query Frame = 2 Query: 2 PTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAP--YKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGY----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVD-----QPGGNKKTLILQEI 547 P K+ P S EL+ +FL +F YD D DGA+ P E + LF T P +PW + K G +TL G++ +W LMTL+D ++ L Y+G+ AA+ VTR+R +D K+Q+ R+V++C + GP+ +GK+ + FL E+ G+++ NVV+ Q G +K LIL++I Sbjct: 316 PLKIPPGSSTELSHRGQQFLIAVFERYDRDGDGALSPEEHKMLFSTCPAAPWSYSTDIRKSCPINETTGWVTLHGWLCRWTLMTLIDVVKTMEYLAYLGFNVHENDSQLAAIHVTRERRIDLAKRQSSRSVYKCHVIGPKGSGKTGMCRGFL----VEDMHKLIGKEFKTNVVNCINSVQVYGQEKHLILRDI 504
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO1_BOVIN (Mitochondrial Rho GTPase 1 OS=Bos taurus GN=RHOT1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 6.995e-25 Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFS--ENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 K+ PD + EL A FL+ F +D+D D A+ P EL+DLF P PW + T G +T +GF+S+W L T LD + L L Y+GY A+A+ VTR + +D +K+QT+RNVFRC + G +N GKS +L + L R + + YA+N V G +K L+L +I E Sbjct: 305 KIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFKVFPYIPWGP-DVNNTVCTNEKGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKIDLQKKQTQRNVFRCNVIGMKNCGKSGVLQALLGRNLTRQKKIRDDHKSYYAINTV-YVYGQEKYLLLHDISE 491
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO1_HUMAN (Mitochondrial Rho GTPase 1 OS=Homo sapiens GN=RHOT1 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.193e-24 Identity = 71/189 (37.57%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPF--SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 K+ PD + EL A FL+ F +D+D D A+ P EL+DLF P PW + T G +T +GF+S+W L T LD + L L Y+GY A+A+ VTR + +D +K+QT+RNVFRC + G +N GKS +L + L R + YA+N V G +K L+L +I E Sbjct: 292 KIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFKVFPYIPWGP-DVNNTVCTNERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAVTVTRDKKIDLQKKQTQRNVFRCNVIGVKNCGKSGVLQALLGRNLMRQKKIREDHKSYYAINTV-YVYGQEKYLLLHDISE 478
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO2_XENTR (Mitochondrial Rho GTPase 2 OS=Xenopus tropicalis GN=rhot2 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.658e-24 Identity = 70/189 (37.04%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 2 PTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGN-LTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQ-YAVNVVDQPGGNKKTLILQEI 547 P ++ + S EL +FL+ F +D+D DGA+ P+EL+ F P +PW P + TA G L L G++ +W L+ LD L +L Y+GY A+ VTR++S+D +K QT+RNVF C + GP+ GKSA L +FL + E Y+VN V GG +K LIL E+ Sbjct: 290 PLRIPHESSTELNHFGYQFLQKAFEKHDLDEDGALSPSELQSFFSVFPYTPW--GPELASTVCTAQGGYLPLHGYLCQWTLVAYLDVHRCLEHLGYLGYPILCEQESQTHAITVTREKSIDLEKGQTQRNVFLCRVIGPRGTGKSAFLRAFLGQSLEEQQQSNKPPSFYSVNTV-LVGGQEKYLILFEV 475
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO1_MOUSE (Mitochondrial Rho GTPase 1 OS=Mus musculus GN=Rhot1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.534e-24 Identity = 70/189 (37.04%), Postives = 100/189 (52.91%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPF--SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 K+ PD + EL A FL+ F +D+D D A+ P EL+DLF P PW + T G +T +GF+S+W L T LD + L L Y+GY A+A+ VTR + +D +K+QT+RNVFRC + G + GK+ +L S L R + YA+N V G +K L+L +I E Sbjct: 305 KIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFQVFPYIPWGP-DVNNTVCTNERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKIDLQKKQTQRNVFRCNVIGVKGCGKTGVLQSLLGRNLMRQKKIRDDHKSYYAINTV-YVYGQEKYLLLHDISE 491
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO1_CHICK (Mitochondrial Rho GTPase 1 OS=Gallus gallus GN=RHOT1 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.534e-24 Identity = 68/189 (35.98%), Postives = 98/189 (51.85%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPF--SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 K+ PD + EL A FL+ IF +D+D D A+ P EL+DLF P PW G +T +GF+S+W L T LD + L L Y+GY A+A+ VTR + +D +K+QT+RNVFRC + G + GKS +L + L R YA+N V G +K L+L ++ + Sbjct: 292 KIPPDCTTELNHHAYLFLQSIFDKHDLDRDCALSPDELKDLFKVFPYMPWGPDVNNTVCTNGKGGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILAEQESQASAITVTRDKKIDLQKKQTQRNVFRCNVVGMKGCGKSGVLQALLGRNLMRQRQIRAEHKSYYAINTV-YVYGQEKYLLLHDVSD 479
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO_DROPS (Mitochondrial Rho GTPase OS=Drosophila pseudoobscura pseudoobscura GN=Miro PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.319e-23 Identity = 66/192 (34.38%), Postives = 101/192 (52.60%), Query Frame = 2 Query: 2 PTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWD-EAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGY----GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVD-----QPGGNKKTLILQEI 547 P K+ P S EL+ +FL +F YD D DGA+ P E + LF P SPW + + G +TL G++ +W LMTL+D ++ L Y+G+ AA+ VTR+R +D K+Q+ R+V++C + GP +GK+ L FL + G+++ NVV Q G +K LIL++I Sbjct: 314 PLKIPPGSSTELSHRGQKFLISVFERYDRDCDGALSPEEHKMLFSVCPSSPWSYSTDIRKSCPINDKGWVTLHGWLCRWTLMTLIDVVKTMEYLAYLGFNVHENDSLLAAIHVTRERRIDLAKRQSSRSVYKCHVIGPNGSGKTGLCRGFL----VDEMQKLIGKEFKTNVVHCINSVQVYGQEKHLILRDI 501 The following BLAST results are available for this feature:
BLAST of DC900045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900045 ID=DC900045; Name=DC900045; organism=Citrus sinensis; type=EST; length=579bpback to top |