DC900045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO2_RAT (Mitochondrial Rho GTPase 2 OS=Rattus norvegicus GN=Rhot2 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.319e-23 Identity = 68/190 (35.79%), Postives = 102/190 (53.68%), Query Frame = 2 Query: 2 PTKLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSE---NYAPTTGEQYAVNVVDQPGGNKKTLILQEI 547 P + P S EL +F++ +F +D D+DG + P ELE LF +PW P T G L+L+G++ +W L+T LD +H LA+L Y+GY A A+ VTR++ +D++K QT+R+V C + G + GKSA L +FL E AP + +N V + G +K LIL E+ Sbjct: 290 PLYVPPGCSTELNHRGYQFVQRVFEKHDQDHDGVLSPTELESLFSVFSVAPW--GPELLHTVPTEAGCLSLRGYLCQWTLVTYLDVQHCLAHLGYLGYPTLCEQDSQAQAITVTREKRLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGHSLGEARDRDAPEKLPTHTINTV-RVSGQEKYLILCEV 476
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_USTMA (Mitochondrial Rho GTPase 1 OS=Ustilago maydis GN=GEM1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.939e-23 Identity = 69/216 (31.94%), Postives = 111/216 (51.39%), Query Frame = 2 Query: 17 PDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPES--PWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPAA-------------------------------------ALRVTRKRSVDRKKQ-QTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQE 544 P+ SVEL+ +FL IF ++D D DGA+ EL+ LF+TAP++ PW + + T G +TL+G++++W++ TLLD R +LA L Y+GY P + AL++TR R D+KK+ +R+VF + G +GK+A+L + + + F+ Y PT V+ V+Q G ++ L+LQE Sbjct: 324 PECSVELSPNGYQFLTDIFEVHDKDRDGALSEEELDSLFITAPDNRHPWQGTGFPTSTITDEHGAVTLQGWLAQWSMTTLLDHRTTLAYLAYLGYPSFPLSGSSGSASTPAPIPLTPTGPPGSRPSRNRTPCPPSTITALKLTRPRKTDKKKKGAIQRSVFLGFVLGAAGSGKTAILRNMVGKRFANAYEPTQKMMSVVSTVEQAGA-ERYLVLQE 538
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_KLULA (Mitochondrial Rho GTPase 1 OS=Kluyveromyces lactis GN=GEM1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.939e-23 Identity = 67/185 (36.22%), Postives = 97/185 (52.43%), Query Frame = 2 Query: 26 SVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGDPAAALRVTRKRSVDRKK------QQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEE 556 SVEL+ F F YD DNDG + EL LF T P P W E + +TL+G+++ W++ T +D + LIY+G+ D AL++T+ R R+ +R V C + G N+GKS+LL SFL R FSE Y+PT + +VN ++ GG + LILQE+ E+ Sbjct: 322 SVELSPLGYRFFVDTFLKYDKDNDGGLNNDELHLLFKTTPGLPHLWIETNFPFLTVVNNSACITLQGWLALWSMTTFIDYSVTTEYLIYLGFDKDAKNALQITKPRRKRRRNGVYYRAPVFDRKVLNCYMLGKGNSGKSSLLESFLGRSFSEAYSPTIRPKISVNSLELKGGKQYYLILQELGEQ 506
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO1_DANRE (Mitochondrial Rho GTPase 1-A OS=Danio rerio GN=rhot1a PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.838e-23 Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPF--SENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 K+ PD + EL A FL+ +F +D D D A+ P EL+DLF P PW + T G +T +G++S+W L T LD + L L Y+GY AAA+ VTR + +D +K+QT+R+VFRC + G + GKS L +FL R + YA++ G K L+ + +P+ Sbjct: 292 KIPPDCTTELNHNAYLFLQSVFDKHDKDRDCALSPDELKDLFKVFPYMPWGP-DVNNTVCTNEQGWITYQGYLSQWTLTTYLDVQRCLEYLGYLGYSIIQEQESQAAAITVTRNKRIDLQKKQTQRSVFRCNVLGARGCGKSGFLQAFLGRNLVRQKRIREDHKSYYAISTTYVYGQEKYLLLHEVLPD 479
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO2_MOUSE (Mitochondrial Rho GTPase 2 OS=Mus musculus GN=Rhot2 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.235e-21 Identity = 64/184 (34.78%), Postives = 100/184 (54.35%), Query Frame = 2 Query: 17 PDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVD--QPGGNKKTLILQEI 547 P S EL +F++ +F +D D+DG + P EL++LF +PW P T G L L G++ +W LMT LD + LA+L Y+GY A A+ VTR++ +D++K QT+R+V C + G + GKSA L +FL E P E++ ++ ++ + G +K LIL E+ Sbjct: 295 PGCSTELNHRGYQFVQRMFEKHDQDHDGVLSPTELQNLFSVFSGAPW--GPELLHTVPTQAGCLPLHGYLCQWTLMTYLDVQQCLAHLGYLGYPTLCEQDSQAQAITVTREKKLDQEKGQTQRSVLMCKVLGARGVGKSAFLQAFLGNSLGEARDPP--EKFPLHTINTVRVNGQEKYLILCEV 474
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_YARLI (Mitochondrial Rho GTPase 1 OS=Yarrowia lipolytica GN=GEM1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.593e-21 Identity = 64/211 (30.33%), Postives = 109/211 (51.66%), Query Frame = 2 Query: 20 DQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYGGD------------------PAAALRVTRKRSVDRKKQQT-----------ERNVFRCLLFGPQNAGKSALLNSFLERP-FSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEE 556 + SVEL+ E FL +F L+D DNDG + +EL+ LF P P W + + G++TL+G+++ W++ T LD + ++A L Y+G+ GD AAA R+T + KK+++ +R+VF C + G +GK++LL +FL RP ++ Y PT VN V+ GG + ++++E+ ++ Sbjct: 305 NSSVELSPEGYRFLVDLFLLFDKDNDGGLNDSELKTLFKPTPGIPQKWLDFNFPYTTVHDEQGSITLQGWLALWSMTTFLDYKTTMAYLAYLGFEGDNSKKRFSGSSVTVAMTTAAAAAARLTAFKVTKPKKRRSRPRPYYRATPNDRSVFNCFVLGSHMSGKTSLLEAFLNRPLMTDIYKPTIRPVSVVNSVEMTGGKQCYMVMEELGQQ 515
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: GEM1_SCHPO (Mitochondrial Rho GTPase 1 OS=Schizosaccharomyces pombe GN=gem1 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.329e-20 Identity = 66/189 (34.92%), Postives = 105/189 (55.56%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESP--WDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG----GDPAAALRVTRKR-SVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPE 553 +++P Q VEL+ + FL +F +D DNDGA+ EL LF P P W + + ++ G +T G++++W+++TL D + +LA L Y+G+ G AL+V RKR S +RK + +RNVF C + G ++ GK+ALL+SF+ + P T VN V+ ++ L+L EI E Sbjct: 292 EVAPGQIVELSPKGYRFLVDLFYQFDRDNDGALNNEELSALFRHTPGLPEIWVSSQFPNSTVLNEHGYVTYNGWLAQWSMITLFDYKTTLAYLAYLGFDTDGRGHNTDALKVMRKRVSQNRKVSKYDRNVFLCFVVGSKSCGKTALLSSFINNN-TNRLTPNT----VVNSVEFQ-STQRYLVLSEIGE 474
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO2_DANRE (Mitochondrial Rho GTPase 2 OS=Danio rerio GN=rhot2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.509e-19 Identity = 62/189 (32.80%), Postives = 96/189 (50.79%), Query Frame = 2 Query: 8 KLSPDQSVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGYG-----GDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFS-ENYAPTTGEQYAVNVVDQPGGNKKTLILQEIPEE 556 ++S + EL +FL +F YD D D A+ PAEL++LF P PW Y + T ++ G++ +W L+ LD L +L Y+GY +A+ VTR++++D +QT+R VF C + GP+ GK+ L +FL+R + P YA+N V K LIL+E+ E Sbjct: 292 RVSVGCTTELNHLGHQFLLKLFEKYDEDKDSALSPAELKNLFSVLPYMPWSSTVYSNIPLTDDC-YISQHGYLCQWMLLAYLDVHRCLEHLGYLGYPILMEQECQTSAITVTREKALDLDNRQTQRTVFLCKVIGPRGTGKTDFLRAFLQRSTERSDRDPGAPSIYAINTV-SIANQDKYLILEEVDVE 478
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO_CAEBR (Mitochondrial Rho GTPase OS=Caenorhabditis briggsae GN=CBG01740 PE=3 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.082e-17 Identity = 59/187 (31.55%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 26 SVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLF--LTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGY---------GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVD--QPGGNKKTLILQEI 547 S EL+ E V+F+ +F YD D DG + P+EL++LF +AP D A ET G LT G+++ W + TL++ + L Y+G+ G+ ++RVTR+R D + T+R VF+CL+ G ++AGK+ + S R S+ G +++ V++ + K L+L+E+ Sbjct: 314 STELSPEGVQFVSALFEKYDEDKDGCLSPSELQNLFSVCSAPVITKDNIL---ALETNQRGWLTYNGYMAYWNMTTLINLTQTFEQLAYLGFPVGRSGPGRAGNTLDSIRVTRERKKDLENHGTDRKVFQCLVVGAKDAGKTVFMQSLAGRGMSD--VAQIGRRHSPFVINRVKVKEESKYLLLREV 495
BLAST of DC900045 vs. ExPASy Swiss-Prot
Match: MIRO_CAEEL (Mitochondrial Rho GTPase OS=Caenorhabditis elegans GN=K08F11.5 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.413e-17 Identity = 57/185 (30.81%), Postives = 97/185 (52.43%), Query Frame = 2 Query: 26 SVELASEAVEFLRGIFGLYDIDNDGAVRPAELEDLFLTAPESPWDEAPYKDAAETTALGNLTLKGFVSKWALMTLLDPRHSLANLIYVGY---------GGDPAAALRVTRKRSVDRKKQQTERNVFRCLLFGPQNAGKSALLNSFLERPFSENYAPTTGEQYAVNVVD--QPGGNKKTLILQEI 547 S EL+ E V+F+ +F YD D DG + P+EL++LF P P A ET G LT G+++ W + TL++ + L Y+G+ G+ ++RVTR+R D + T+R VF+CL+ G ++AGK+ + S R ++ G +++ V++ + K L+L+E+ Sbjct: 302 STELSPEGVQFVSALFEKYDEDKDGCLSPSELQNLFSVCPV-PVITKDNILALETNQRGWLTYNGYMAYWNMTTLINLTQTFEQLAYLGFPVGRSGPGRAGNTLDSIRVTRERKKDLENHGTDRKVFQCLVVGAKDAGKTVFMQSLAGRGMAD--VAQIGRRHSPFVINRVRVKEESKYLLLREV 483 The following BLAST results are available for this feature:
BLAST of DC900045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900045 ID=DC900045; Name=DC900045; organism=Citrus sinensis; type=EST; length=579bpback to top |