CN185811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: PRP28_YARLI (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Yarrowia lipolytica GN=PRP28 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 44/132 (33.33%), Postives = 77/132 (58.33%), Query Frame = -1 Query: 399 KNRKLNDLLDALDFNQVVIFVKSVSRAAE-LNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 791 + R+L D++ + ++ + R E ++ LV + + IH G QE+R + K G +LVATD+ GRG+DI V++V+N+ M ++ ++Y HR+GR GR G +G A+TF+ D D+L +++ Sbjct: 417 RKRRLLDIISKRQYRPPIVVFLNYKRDCEAVSDALVAAGWRTAIIHGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIPNVSLVVNFQMANNIESYTHRIGRTGRAGKRGTAVTFLGQ-EDDDVLFELK 547
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: PRP28_DEBHA (Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Debaryomyces hansenii GN=PRP28 PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = -1 Query: 363 RKLNDLLDALDFNQ-------VVIFVKSVSRAAELNKLLVECNFP-SICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE 785 +KL+ L L F++ ++IF EL L F + IH SQE R F+EG +IL+ATD+ RGIDI V++V+NY M D Y+HR+GR GR G KG + TF+ DS++ ++ K+ PE Sbjct: 418 KKLDKLFSILRFHKDENRNYSIIIFANFKKACEELAYELSRKGFSDNTVIHGSKSQEARERAIDSFREGKDKILIATDVAARGIDIPNVSLVVNYQMTKKFDEYIHRIGRTGRAGNKGTSCTFIDD-GDSEVFLDLKKFLNKGKKKCPE 565
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DDX47_HUMAN (Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens GN=DDX47 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = -1 Query: 354 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 791 K+ L +L+ L N +IF + + LL F +I +H MSQ +RL FK + IL+ATD+ RG+DI V++V+N+D+P + Y+HRVGR R G G AITFV+ D ++ +++ + P Q D Sbjct: 250 KDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ-YDVELFQRIEHLIGKKLPGFPTQDD 394
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DDX47_CAEEL (Putative ATP-dependent RNA helicase T26G10.1 OS=Caenorhabditis elegans GN=T26G10.1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 45/126 (35.71%), Postives = 71/126 (56.35%), Query Frame = -1 Query: 372 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKE 749 N ++F + + ++ +L + ++ +H MSQE+RL FK + ILV TD+ RG+DI V++VINYDMP + Y+HRVGR R G G+AIT V+ D + +++A + E Sbjct: 284 NSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQ-YDVEAYQKIEANLGKKLDE 408
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DDX47_BOVIN (Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus GN=DDX47 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = -1 Query: 354 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 791 K+ L +L+ L N +IF + + LL F +I +H MSQ +RL FK + IL+ATD+ RG+DI V++V+N+D+P + Y+HRVGR R G G AITFV+ D ++ +++ + P Q D Sbjct: 252 KDTYLVYILNELAGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ-YDVELFQRIEHLIGKKLPVFPTQDD 396
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DBP8_MAGGR (ATP-dependent RNA helicase DBP8 OS=Magnaporthe grisea GN=DBP8 PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 46/117 (39.32%), Postives = 69/117 (58.97%), Query Frame = -1 Query: 393 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQAR 743 ++IFV S A L+ LL + +HS + Q++R+ F+ RILVATD+ RG+DI V++V+NYD+P D Y+HRVGR R G KG A+ FV D +++ ++ R Sbjct: 394 IIIFVNRTSTAQFLHHLLRLLDHRVTSLHSKLRQQQRIDNLGRFRASAARILVATDVASRGLDIPEVSVVVNYDLPRDPDDYIHRVGRTARAGRKGEAVNFVGQ-RDVELVLAIEKR 509
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DBP8_LODEL (ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus GN=DBP8 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 49/129 (37.98%), Postives = 71/129 (55.04%), Query Frame = -1 Query: 354 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQID 740 V+FV A L ++L + F +HS M Q ER FK G RIL+ATD+ RG+DI V +V+N+D+P D ++HRVGR R G KG AI+ + D + + ++ R + EL E +D Sbjct: 260 VVFVNRTMTAEVLRRMLRKLEFKVASLHSEMPQTERTNSLHRFKAGAARILIATDVASRGLDIPTVELVVNFDIPADPDDFIHRVGRTARAGRKGDAISIIGE-KDIERIESIEERINKKM-ELLEGVD 386
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DBP2_SCHPO (ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe GN=dbp2 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 50/133 (37.59%), Postives = 75/133 (56.39%), Query Frame = -1 Query: 354 NQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDI-KELPEQID 749 N+V+IF + A ++ + L + +P++ IH +Q+ER F+ G I+VATD+ RGID++ + V NYD P + + Y+HR+GR GR G KG A T+ +S N QAR V I E + ID Sbjct: 370 NKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSD------NAKQARELVSILSEAKQDID 496
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DBP1_CANGA (ATP-dependent RNA helicase DBP1 OS=Candida glabrata GN=DBP1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.315e-17 Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = -1 Query: 426 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 791 KN L D+L ++FV++ A +L L+ NF + IH +Q ER F+ G ILVAT + RG+DI V VINYD+P D Y+HR+GR GR G G+A +F +S S Sbjct: 382 KNSALLDILINEIDGLTLVFVETKRMADQLTDFLIVQNFKATAIHGDRTQAERERALHAFRNGIANILVATAVAARGLDIPNVTNVINYDLPTDIDDYVHRIGRTGRAGNVGVATSFFNSNS 503
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: Y2316_STAA8 (Probable DEAD-box ATP-dependent RNA helicase SAOUHSC_02316 OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_02316 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.330e-17 Identity = 46/131 (35.11%), Postives = 76/131 (58.02%), Query Frame = -1 Query: 399 KLNDLLDALDFNQ---VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQ 782 K + + LD +Q ++F ++ R EL L+ + + +H ++Q +RL K FK ILVATD+ RG+DI V+ V N+D+P ++Y HR+GR GR G +G+A+TFV+ + D + Q++ Sbjct: 227 KFDTFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPI-EMDYIRQIE 356 The following BLAST results are available for this feature:
BLAST of CN185811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185811 ID=CN185811; Name=CN185811; organism=Citrus sinensis; type=EST; length=791bpback to top |