CN185802

Overview
NameCN185802
Unique NameCN185802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.205e-29
Identity = 62/143 (43.36%), Postives = 94/143 (65.73%), Query Frame = -1
Query:  192 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 620
            KITITNDKGRLSK+E+E+MV EAE+YKAEDE  + +V AKN+LE + ++++ ++++E +  K+   D++K++D   + + WL+ NQLAE +E+E + +ELE IC PI +++Y                    S  GP IEEVD
Sbjct:  502 KITITNDKGRLSKEEVERMVHEAEQYKAEDEAQRDRVAAKNSLEAHVFHVKGSLQEESLRDKIPEEDRRKMQDKCREVLAWLEHNQLAEKEEYEHQKRELEQICRPIFSRLYGGPGVPGGSSCGTQARQGDPS-TGPIIEEVD 643          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 4.186e-29
Identity = 59/114 (51.75%), Postives = 89/114 (78.07%), Query Frame = -1
Query:  282 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 620
            KITITND+ RLS ++IE+M+ +AEK+  +D++ K K EA+N LE+YAYN++N ++D EK+G KLD  DKK IE+A+++AI WL SN  A A+E +++ K+LES   PI++K+Y+
Sbjct:  528 KITITNDQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.141e-29
Identity = 61/143 (42.66%), Postives = 92/143 (64.34%), Query Frame = -1
Query:  192 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 620
            KITITNDKGRLSK+E+E+MV+EA++YK EDE  + +V AKN+LE Y ++++ ++ +E +  K+   D+ K++D   + + WL+ NQLAE +E+E + +ELE IC PI +++Y                    S  GP IEEVD
Sbjct:  502 KITITNDKGRLSKEEVERMVREADEYKVEDEAQRDRVAAKNSLEAYVFHVKGSLHEESLRDKIPEEDRCKVQDKCQEVLTWLEHNQLAEKEEYEHQKRELEQICRPIFSRLYGAPGIPGGSSCGAQARQGAPS-TGPVIEEVD 643          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 7.141e-29
Identity = 69/143 (48.25%), Postives = 91/143 (63.64%), Query Frame = -1
Query:  192 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 620
            KITITNDKGRLSK+EIE+MV +A+KYKAEDE+ + +V AKN+LE+Y Y M+  V+ E +  K+  +D++ I    +  I WLD +Q AE  E+E K +ELE +C PII K+YQ                  GS  GP IEEVD
Sbjct:  498 KITITNDKGRLSKEEIERMVADADKYKAEDEKQRDRVSAKNSLESYVYTMKQQVEGE-LKEKIPESDRQVIISKCEDTISWLDVHQSAEKHEYESKREELEKVCAPIITKVYQ--AGGMPGGMHEASGAGGGSGKGPTIEEVD 637          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: MAG29_DERFA (Allergen MAG29 (Fragment) OS=Dermatophagoides farinae GN=MAG29 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.218e-28
Identity = 56/101 (55.45%), Postives = 79/101 (78.22%), Query Frame = -1
Query:  282 KDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 584
            KD+IE+MV+EAE YK ED++ + ++ AKN+LE YA+ M+ T+ +E I SK+   D+KKI D +D+ ++WLD+N LAE DEFE + KELES+CNPII K+YQ
Sbjct:    1 KDDIERMVKEAESYKEEDDKQRDRIAAKNSLEGYAFQMKATLDEEAIKSKVSEEDRKKILDKVDEVLKWLDANALAEKDEFEHQRKELESVCNPIITKLYQ 101          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.218e-28
Identity = 59/114 (51.75%), Postives = 88/114 (77.19%), Query Frame = -1
Query:  282 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 620
            KITITND+ RLS ++IE+M+ +AEK+  +D++ K+K EA+N LE+YAY+++N + D EK+G KLD  DKK IE+A+D+AI WL SN  A A+E +++ KELE    PI++K+Y+
Sbjct:  528 KITITNDQNRLSPEDIERMINDAEKFAEDDKKVKEKAEARNELESYAYSLKNQIGDKEKLGGKLDEDDKKTIEEAVDEAISWLGSNADASAEELKEQKKELEGKVQPIVSKLYK 641          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.714e-28
Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = -1
Query:  192 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ--XXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 623
            + ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q                    G  +GP +EEVD
Sbjct:  497 KNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQQGAGAAGGPGANCGQQAGGFGGYSGPTVEEVD 641          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.714e-28
Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = -1
Query:  192 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ--XXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 623
            + ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q                    G  +GP +EEVD
Sbjct:  497 KNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQQGAGAAGGPGANCGQQAGGFGGYSGPTVEEVD 641          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.714e-28
Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = -1
Query:  192 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ--XXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 623
            + ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q                    G  +GP +EEVD
Sbjct:  497 KNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQQGAGAAGGPGANCGQQAGGFGGYSGPTVEEVD 641          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.714e-28
Identity = 65/146 (44.52%), Postives = 94/146 (64.38%), Query Frame = -1
Query:  192 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ--XXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 623
            + ITI NDKGRLS+ EI++MV EAEKY  EDE+H++++ ++NALE+Y +N++ +V+    G KLD ADK  + D  ++ I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q                    G  +GP +EEVD
Sbjct:  497 KNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNETIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQQGAGAAGGPGANCGQQAGGFGGYSGPTVEEVD 641          
The following BLAST results are available for this feature:
BLAST of CN185802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
HSP76_HUMAN3.205e-2943.36Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP7C_CAEEL4.186e-2951.75Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
HSP76_PIG7.141e-2942.66Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP70_SCHMA7.141e-2948.25Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
MAG29_DERFA1.218e-2855.45Allergen MAG29 (Fragment) OS=Dermatophagoides fari... [more]
HSP7C_CAEBR1.218e-2851.75Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
HSP75_DROME2.714e-2844.52Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME2.714e-2844.52Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME2.714e-2844.52Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROME2.714e-2844.52Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185802 ID=CN185802; Name=CN185802; organism=Citrus sinensis; type=EST; length=623bp
TTTTAGGGACTGAAAATATTCATTATATAAATTGGTCCGAATTACCAGTA
AAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATATTCATCCTAAGGCT
AAAGCAACATAAGATAAAAACCAAACGTCCAGTTTTCCCACCGTCAAAAA
ACCGACCTCCCACAAACACAGCAAAATAAACTGGAAGCTTAGTCAACTTC
CTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGGAGGAGTATCATCAT
CCATGTCACCGCCCATATCACCACCAGCACCTTGATACATCTTGGCAATG
ATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTGTCTTCAAATTCATC
GGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAATTGCCTGGTCAATGG
CATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTTTGGAGCCGATCTTC
TCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAGTTTTCCAAGGCATT
CTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTCAGCCTTGTACTTCT
CGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTGACAATCTACCCTTG
TCGTTGGTGATTGTGATCTTCCT
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