CN185802

Overview
NameCN185802
Unique NameCN185802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 3.918e-27
Identity = 63/148 (42.57%), Postives = 91/148 (61.49%), Query Frame = -1
Query:  192 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSA----AGPKIEEVD 623
            + ITI NDKGRLS+ EI++MV EAEKY  EDE+ ++++ ++NALE+Y +N++ +V+    G KLD ADK  + D  +  I+WLDSN  AE +EF+ KM+EL   C+PI+ KM+Q                         +GP +EEVD
Sbjct:  497 KNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKQRQRITSRNALESYVFNVKQSVEQAPAG-KLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKMEELTRHCSPIMTKMHQQGAGAGAAGGPGANCGQQAGGFGGYSGPTVEEVD 643          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 56/113 (49.56%), Postives = 84/113 (74.34%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            K+TITND  RLS ++IE+M+ +A+K+ A+D+  K+KVE++N LE YAY M+  + D EK+G KL   DK  IE A+++AI+WL SNQ A  +E +++ KELES+  PI++K+Y
Sbjct:  525 KLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 55/113 (48.67%), Postives = 87/113 (76.99%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ IE A+++ I+WL+S+Q A+ ++F+ K KELE I  PI+ K+Y
Sbjct:  524 KITITNDQNRLTPEEIERMVTDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIVGKLY 636          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_PONAB (78 kDa glucose-regulated protein OS=Pongo abelii GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 55/113 (48.67%), Postives = 88/113 (77.88%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  523 KITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 55/113 (48.67%), Postives = 88/113 (77.88%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  524 KITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 55/113 (48.67%), Postives = 88/113 (77.88%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  523 KITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 55/113 (48.67%), Postives = 88/113 (77.88%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  523 KITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_BOVIN (78 kDa glucose-regulated protein OS=Bos taurus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.117e-27
Identity = 55/113 (48.67%), Postives = 88/113 (77.88%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KITITND+ RL+ +EIE+MV +AEK+  ED++ K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  524 KITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.684e-27
Identity = 55/113 (48.67%), Postives = 87/113 (76.99%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KITITND+ RL+ +EIE+MV +AEK+  ED+  K++++ +N LE+YAY+++N + D EK+G KL   DK+ +E A+++ I+WL+S+Q A+ ++F+ K KELE I  PII+K+Y
Sbjct:  523 KITITNDQNRLTPEEIERMVNDAEKFAEEDKRLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.140e-26
Identity = 62/149 (41.61%), Postives = 91/149 (61.07%), Query Frame = -1
Query:  192 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSA-----AGPKIEEVD 623
            + ITI NDKGRLS+ EI++MV EAEKY  EDE+ ++++ ++NALE+Y +N++  V D+    KLD ADK  + D  +  I+WLDSN  AE +EF+ K++EL   C+PI+ KM+Q                   +      +GP +EEVD
Sbjct:  497 KNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKQRQRITSRNALESYVFNVKQAV-DQAPAGKLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHCSPIMTKMHQQGAGAGAGAGGPGANCGQQAGGFGGYSGPTVEEVD 644          
The following BLAST results are available for this feature:
BLAST of CN185802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
HSP72_DROSI3.918e-2742.57Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP7D_CAEEL5.117e-2749.56Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
GRP78_XENLA5.117e-2748.6778 kDa glucose-regulated protein OS=Xenopus laevis... [more]
GRP78_PONAB5.117e-2748.6778 kDa glucose-regulated protein OS=Pongo abelii G... [more]
GRP78_MOUSE5.117e-2748.6778 kDa glucose-regulated protein OS=Mus musculus G... [more]
GRP78_MESAU5.117e-2748.6778 kDa glucose-regulated protein OS=Mesocricetus a... [more]
GRP78_HUMAN5.117e-2748.6778 kDa glucose-regulated protein OS=Homo sapiens G... [more]
GRP78_BOVIN5.117e-2748.6778 kDa glucose-regulated protein OS=Bos taurus GN=... [more]
GRP78_SPETR6.684e-2748.6778 kDa glucose-regulated protein OS=Spermophilus t... [more]
HSP71_DROSI1.140e-2641.61Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185802 ID=CN185802; Name=CN185802; organism=Citrus sinensis; type=EST; length=623bp
TTTTAGGGACTGAAAATATTCATTATATAAATTGGTCCGAATTACCAGTA
AAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATATTCATCCTAAGGCT
AAAGCAACATAAGATAAAAACCAAACGTCCAGTTTTCCCACCGTCAAAAA
ACCGACCTCCCACAAACACAGCAAAATAAACTGGAAGCTTAGTCAACTTC
CTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGGAGGAGTATCATCAT
CCATGTCACCGCCCATATCACCACCAGCACCTTGATACATCTTGGCAATG
ATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTGTCTTCAAATTCATC
GGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAATTGCCTGGTCAATGG
CATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTTTGGAGCCGATCTTC
TCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAGTTTTCCAAGGCATT
CTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTCAGCCTTGTACTTCT
CGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTGACAATCTACCCTTG
TCGTTGGTGATTGTGATCTTCCT
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