CN185802

Overview
NameCN185802
Unique NameCN185802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.140e-26
Identity = 56/114 (49.12%), Postives = 84/114 (73.68%), Query Frame = -1
Query:  285 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 623
            R ITITNDKGRLSK++IEKM+ +AEK+  ED+  ++KVEAKN L+NY  +M+ TV+D +K+  K++  DK  I  A+  A  WL++N  A+++  + K+K+LE++C PII K+Y
Sbjct:  521 RGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNKLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLY 634          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.489e-26
Identity = 52/114 (45.61%), Postives = 91/114 (79.82%), Query Frame = -1
Query:  282 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 620
            KI ITND+ RL+ ++I++M+++AEK+  ED++ K++VE++N LE+YAY+++N + D +K+G+KL   +K K+E AID++I+WL+ N  A+ +E++ + K+LE+I  P+IAK+YQ
Sbjct:  523 KIVITNDQNRLTPEDIDRMIRDAEKFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPDADPEEYKKQKKDLEAIVQPVIAKLYQ 636          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFA (78 kDa glucose-regulated protein homolog (Fragment) OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.489e-26
Identity = 56/114 (49.12%), Postives = 84/114 (73.68%), Query Frame = -1
Query:  285 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 623
            R ITITNDKGRLSK++IEKM+ +AEK+  ED+  ++KVEAKN L+NY  +M+ TV+D +K+  K++  DK  I  A+  A  WL++N  A+++  + K+K+LE++C PII K+Y
Sbjct:  145 RGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNNLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLY 258          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP73_PLAFA (Heat shock 70 kDa protein PPF203 (Fragment) OS=Plasmodium falciparum PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.540e-26
Identity = 51/101 (50.50%), Postives = 76/101 (75.25%), Query Frame = -1
Query:  318 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELE 620
            +ITITNDKGRLSKD+I++MV +AEKYK EDE++K ++EA+N LENY YN++NT++DE + +K+   D +K    +   + WL+ NQ AE +E+ +K K+ E
Sbjct:  100 QITITNDKGRLSKDDIDRMVNDAEKYKEEDEQNKNRIEARNNLENYCYNVKNTLQDENLKTKIPKDDSEKCMKTVKSVLDWLEKNQTAETEEYNEKEKDTE 200          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.260e-25
Identity = 55/114 (48.25%), Postives = 86/114 (75.44%), Query Frame = -1
Query:  282 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAIDQAIQWLDSNQL-AEADEFEDKMKELESICNPIIAKMYQ 617
            ITITNDKGRLSKDEIE+MV+EAE++  ED   ++ +EAKN+LENYA+++RN V D+  +G K+   DK+ + DA+ + ++WL++N + A  ++FE+K + L +I  PI +K+Y+
Sbjct:  531 ITITNDKGRLSKDEIERMVEEAERFAEEDALIRETIEAKNSLENYAHSLRNQVADKSGLGGKISADDKEALNDAVTETLEWLEANSVSATKEDFEEKKEALSAIAYPITSKIYE 644          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.646e-25
Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 617
            ITITNDK RLS+ +I++MV+EA     ED+  K++VEAKN LENY Y ++NT+ D +KIG K++  DK+ IE AI  A+ WLD N  AE +EF+++ K LE I  PI +K+Y
Sbjct:  527 ITITNDKERLSQADIDRMVKEAADAADEDKAAKERVEAKNTLENYIYQIKNTIGDKDKIGGKIESDDKETIETAISDALSWLDVNSSAEKEEFDEQYKILEKIVQPIFSKLY 638          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.808e-25
Identity = 55/113 (48.67%), Postives = 87/113 (76.99%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 617
            ITITNDKGRLSK+EIEK ++EAEK+  +D+E ++KVE++NALENYA++++N   DE   G+KL+  DK+ + DAI++A+++L+ N   A  DEF+++ ++L  +  PI +K+Y
Sbjct:  534 ITITNDKGRLSKEEIEKKIEEAEKFAQQDKELREKVESRNALENYAHSLKNQANDENGFGAKLEEDDKETLLDAINEALEFLEDNFDTATKDEFDEQKEKLSKVAYPITSKLY 646          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.667e-25
Identity = 59/144 (40.97%), Postives = 87/144 (60.42%), Query Frame = -1
Query:  192 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAAGPKIEEVD 623
            + ITI NDKGRLS+ +I++M+ EAEKY  EDE H++++ A+N LE Y + ++     E  G ++  ADK  I +   +A++WLDSN  AE +E+E K+KELE  C+PI+ KM++                  G   GP +EEVD
Sbjct:  497 KNITIKNDKGRLSQADIDRMLSEAEKYAEEDERHRQRIAARNQLETYLFGVKEAA--ENGGDRISAADKSSIVERCSEAMKWLDSNTTAEKEEYEYKLKELEQFCSPIMTKMHK---GGGDGQQAPNFGQQAGGYKGPTVEEVD 635          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 6.256e-25
Identity = 53/113 (46.90%), Postives = 85/113 (75.22%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 617
            ITITNDKGRL+++EI++MV EAEKY  ED+  ++++EA+N LENYA++++N V DE  +G K+D  DK+ I DA+ +A  WL+ N   A A++F+++ ++L ++  PI +K+Y
Sbjct:  533 ITITNDKGRLTQEEIDRMVAEAEKYAEEDKATRERIEARNGLENYAFSLKNQVNDEDGLGGKIDEEDKETILDAVKEAQDWLEENAATASAEDFDEQKEKLSNVAYPITSKLY 645          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.256e-25
Identity = 54/115 (46.96%), Postives = 88/115 (76.52%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK---IGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 617
            ITITNDKGRLSK++I++MV+EAEKY  +D E K K+E++N+LENYA+ ++  VKDE    +GSKL+  DK+ ++DAI + +++++ N   A ++EFE++ ++L  + +PI +K+Y
Sbjct:  543 ITITNDKGRLSKEDIDRMVEEAEKYAEQDSELKAKIESRNSLENYAHMLKGQVKDESENGLGSKLNDDDKETLDDAIKETLEFIEDNYDSATSEEFEEQKQKLIDVASPITSKLY 657          
The following BLAST results are available for this feature:
BLAST of CN185802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
GRP78_PLAFO1.140e-2649.1278 kDa glucose-regulated protein homolog OS=Plasmo... [more]
HSP7C_DROME1.489e-2645.61Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]
GRP78_PLAFA1.489e-2649.1278 kDa glucose-regulated protein homolog (Fragment... [more]
HSP73_PLAFA2.540e-2650.50Heat shock 70 kDa protein PPF203 (Fragment) OS=Pla... [more]
GRP78_YARLI1.260e-2548.2578 kDa glucose-regulated protein homolog OS=Yarrow... [more]
BIP2_DICDI1.646e-2551.79Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
GRP78_PICAN2.808e-2548.6778 kDa glucose-regulated protein homolog OS=Pichia... [more]
HSP68_DROME3.667e-2540.97Heat shock protein 68 OS=Drosophila melanogaster G... [more]
GRP78_NEUCR6.256e-2546.9078 kDa glucose-regulated protein homolog OS=Neuros... [more]
GRP78_DEBHA6.256e-2546.9678 kDa glucose-regulated protein homolog OS=Debary... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185802 ID=CN185802; Name=CN185802; organism=Citrus sinensis; type=EST; length=623bp
TTTTAGGGACTGAAAATATTCATTATATAAATTGGTCCGAATTACCAGTA
AAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATATTCATCCTAAGGCT
AAAGCAACATAAGATAAAAACCAAACGTCCAGTTTTCCCACCGTCAAAAA
ACCGACCTCCCACAAACACAGCAAAATAAACTGGAAGCTTAGTCAACTTC
CTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGGAGGAGTATCATCAT
CCATGTCACCGCCCATATCACCACCAGCACCTTGATACATCTTGGCAATG
ATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTGTCTTCAAATTCATC
GGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAATTGCCTGGTCAATGG
CATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTTTGGAGCCGATCTTC
TCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAGTTTTCCAAGGCATT
CTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTCAGCCTTGTACTTCT
CGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTGACAATCTACCCTTG
TCGTTGGTGATTGTGATCTTCCT
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