CN185802

Overview
NameCN185802
Unique NameCN185802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.820e-24
Identity = 54/112 (48.21%), Postives = 74/112 (66.07%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KITI+NDKGRLSK EI++M+ EAEKYK ED+  +++V++KN LE Y Y  R  V D   G  L   ++ K+ D       WLD N LAE +EFE  +KE + IC PI++K++
Sbjct:  501 KITISNDKGRLSKAEIDRMLSEAEKYKVEDDRQRERVQSKNNLEAYIYACRQAVDDAPSG-VLSETERSKVRDKCSSEASWLDKNSLAEKEEFESHLKECQRICTPIMSKIH 611          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.055e-24
Identity = 52/113 (46.02%), Postives = 83/113 (73.45%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 617
            ITITNDKGRLS++EI++MV EAE++  ED+  K K+EA+N LENYA++++N V DE  +G ++D  DK+ I DA+ +  +WL+ N   A  ++FE++ ++L ++  PI +K+Y
Sbjct:  543 ITITNDKGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKNQVNDENGLGGQIDEDDKQTILDAVKEVTEWLEDNAATATTEDFEEQKEQLSNVAYPITSKLY 655          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.055e-24
Identity = 52/113 (46.02%), Postives = 83/113 (73.45%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 617
            ITITNDKGRLS++EI++MV EAE++  ED+  K K+EA+N LENYA++++N V DE  +G ++D  DK+ I DA+ +  +WL+ N   A  ++FE++ ++L ++  PI +K+Y
Sbjct:  543 ITITNDKGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKNQVNDENGLGGQIDEDDKQTILDAVKEVTEWLEDNAATATTEDFEEQKEQLSNVAYPITSKLY 655          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.055e-24
Identity = 52/113 (46.02%), Postives = 83/113 (73.45%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEK-IGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 617
            ITITNDKGRLS++EI++MV EAE++  ED+  K K+EA+N LENYA++++N V DE  +G ++D  DK+ I DA+ +  +WL+ N   A  ++FE++ ++L ++  PI +K+Y
Sbjct:  543 ITITNDKGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKNQVNDENGLGGQIDEDDKQTILDAVKEVTEWLEDNAATATTEDFEEQKEQLSNVAYPITSKLY 655          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_YEAST (78 kDa glucose-regulated protein homolog OS=Saccharomyces cerevisiae GN=KAR2 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.296e-24
Identity = 52/112 (46.43%), Postives = 83/112 (74.11%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 617
            ITITNDKGRL+++EI++MV+EAEK+ +ED   K KVE++N LENYA++++N V  + +G KL+  DK+ + DA +  ++WLD N + A A++F++K + L  +  PI +K+Y
Sbjct:  544 ITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLENYAHSLKNQVNGD-LGEKLEEEDKETLLDAANDVLEWLDDNFETAIAEDFDEKFESLSKVAYPITSKLY 654          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_SCHPO (78 kDa glucose-regulated protein homolog OS=Schizosaccharomyces pombe GN=bip1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 9.033e-24
Identity = 50/114 (43.86%), Postives = 85/114 (74.56%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTV-KDEKIGSKLDPADKKKIEDAIDQAIQWLD-SNQLAEADEFEDKMKELESICNPIIAKMY 620
            K+ I NDKGRLS+++IE+MV+EAE++  ED+  K+++EA+N LENYAY+++     DE++G K+DP DK+ + DA++   +WL+   + A  +EFED+ ++L+++ +PI  K+Y
Sbjct:  528 KLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQRQKLDAVVHPITQKLY 641          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.483e-23
Identity = 49/113 (43.36%), Postives = 82/113 (72.57%), Query Frame = -1
Query:  282 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 617
            I I  +  RL+ +EIE+M+Q+AEK+  +D++ K++VE +N LE+ AY+++N VKD EK+G KL   + K IEDA D+AI+W+++N  AE  +++ +   LES+  PI++K+Y+
Sbjct:  523 IVINKETNRLTPEEIERMIQDAEKFSDQDKQVKERVEVRNDLESLAYSIKNQVKDKEKMGGKLSDDEIKTIEDAADEAIKWMENNPQAETSDYKKQKANLESVVQPIVSKLYE 635          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_ECHGR (78 kDa glucose-regulated protein OS=Echinococcus granulosus GN=GRP78 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23
Identity = 48/113 (42.48%), Postives = 82/113 (72.57%), Query Frame = -1
Query:  282 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKD-EKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 617
            I I  +  R++ +EIE+M+Q+AEK+  +D++ K++VE +N LE+ AY+++N VKD EK+G KL   + K IEDA D+AI+W+++N  AE  +++ +   LES+  PI++K+Y+
Sbjct:  523 IVINKETNRITPEEIERMIQDAEKFSDQDKQVKERVEVRNDLESLAYSIKNQVKDKEKMGGKLSDDEIKTIEDAADEAIKWMENNPQAETSDYKKQKANLESVVQPIVSKLYE 635          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_ASHGO (78 kDa glucose-regulated protein homolog OS=Ashbya gossypii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 7.647e-23
Identity = 52/112 (46.43%), Postives = 80/112 (71.43%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWL-DSNQLAEADEFEDKMKELESICNPIIAKMY 617
            +TITN+KGRLSKD+IE+MV EAE Y+ EDEE + KVEA++ LENYA++++N V  + +G KL+  DK+ + +A +  ++WL D++  A  +EF +K + L     PI +K+Y
Sbjct:  540 VTITNEKGRLSKDDIERMVAEAENYQKEDEEIRAKVEARHKLENYAHSLKNQVNGD-LGDKLEEDDKETLLEAANDVLEWLEDNSDSATKEEFNEKFESLSQTAYPITSKLY 650          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: GRP78_CANGA (78 kDa glucose-regulated protein homolog OS=Candida glabrata GN=KAR2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.704e-22
Identity = 51/112 (45.54%), Postives = 80/112 (71.43%), Query Frame = -1
Query:  285 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSN-QLAEADEFEDKMKELESICNPIIAKMY 617
            ITITNDKGRL++DEI++MV+EAEK+ +ED   + K+EA+N LENYA++++N V+ + +  KL+  DK+ + DA +  ++WL+ N   A  +EFE+K + L     PI +K+Y
Sbjct:  530 ITITNDKGRLTQDEIDRMVEEAEKFASEDAVLRTKIEARNKLENYAHSIKNQVEGD-LAEKLEEEDKETLLDAANDTLEWLEDNFDSATTEEFEEKFEALSKTAYPITSKLY 640          
The following BLAST results are available for this feature:
BLAST of CN185802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
HSP7B_DROME1.820e-2448.21Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
GRP78_ASPNG4.055e-2446.0278 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPKA4.055e-2446.0278 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW4.055e-2446.0278 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_YEAST5.296e-2446.4378 kDa glucose-regulated protein homolog OS=Saccha... [more]
GRP78_SCHPO9.033e-2443.8678 kDa glucose-regulated protein homolog OS=Schizo... [more]
GRP78_ECHMU4.483e-2343.3678 kDa glucose-regulated protein OS=Echinococcus m... [more]
GRP78_ECHGR7.647e-2342.4878 kDa glucose-regulated protein OS=Echinococcus g... [more]
GRP78_ASHGO7.647e-2346.4378 kDa glucose-regulated protein homolog OS=Ashbya... [more]
GRP78_CANGA1.704e-2245.5478 kDa glucose-regulated protein homolog OS=Candid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185802 ID=CN185802; Name=CN185802; organism=Citrus sinensis; type=EST; length=623bp
TTTTAGGGACTGAAAATATTCATTATATAAATTGGTCCGAATTACCAGTA
AAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATATTCATCCTAAGGCT
AAAGCAACATAAGATAAAAACCAAACGTCCAGTTTTCCCACCGTCAAAAA
ACCGACCTCCCACAAACACAGCAAAATAAACTGGAAGCTTAGTCAACTTC
CTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGGAGGAGTATCATCAT
CCATGTCACCGCCCATATCACCACCAGCACCTTGATACATCTTGGCAATG
ATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTGTCTTCAAATTCATC
GGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAATTGCCTGGTCAATGG
CATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTTTGGAGCCGATCTTC
TCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAGTTTTCCAAGGCATT
CTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTCAGCCTTGTACTTCT
CGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTGACAATCTACCCTTG
TCGTTGGTGATTGTGATCTTCCT
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