CN185802

Overview
NameCN185802
Unique NameCN185802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJR (Chaperone protein dnaK OS=Campylobacter jejuni (strain RM1221) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.174e-13
Identity = 41/114 (35.96%), Postives = 71/114 (62.28%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            ++I IT   G LS++EI  MV++AE +K ED++ K+ V+A+NA ++ A+ +  ++ +  +G K+  ADK+ I+ A+D   + L  NQ A  +E E KMK L  + + +   MY+
Sbjct:  491 QEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSE--LGEKVAAADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMYK 600          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJE (Chaperone protein dnaK OS=Campylobacter jejuni GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.174e-13
Identity = 41/114 (35.96%), Postives = 71/114 (62.28%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            ++I IT   G LS++EI  MV++AE +K ED++ K+ V+A+NA ++ A+ +  ++ +  +G K+  ADK+ I+ A+D   + L  NQ A  +E E KMK L  + + +   MY+
Sbjct:  491 QEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSE--LGEKVAAADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMYK 600          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJ8 (Chaperone protein dnaK OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=dnaK PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.174e-13
Identity = 41/114 (35.96%), Postives = 71/114 (62.28%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            ++I IT   G LS++EI  MV++AE +K ED++ K+ V+A+NA ++ A+ +  ++ +  +G K+  ADK+ I+ A+D   + L  NQ A  +E E KMK L  + + +   MY+
Sbjct:  491 QEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDARNAADSLAHQVEKSLSE--LGEKVAAADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMYK 600          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP75_CANGA (Heat shock protein SSB OS=Candida glabrata GN=SSB1 PE=3 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.598e-12
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = -1
Query:  375 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWL 617
            ITI+N  GRLS ++IEKMV +AE++KA DE   K+ EAK  LE+Y  ++  TV D  + SKL    K KIE A+  A+  L
Sbjct:  505 ITISNAVGRLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKTKIEAALADALSAL 585          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP75_KLUDE (Heat shock protein SSB OS=Kluyveromyces delphensis GN=SSB PE=3 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12
Identity = 38/78 (48.72%), Postives = 51/78 (65.38%), Query Frame = -1
Query:  384 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAI 617
            ITI+N  GRLS ++IEKMV +AE++KA DE   K+ EAK  LE+Y  ++  TV D  + SKL    K KIE A+  A+
Sbjct:  505 ITISNAVGRLSSEDIEKMVNQAEEFKAADEAFAKRHEAKQRLESYVASIEQTVTDPVLSSKLKRGSKTKIEAALADAL 582          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_OENOB (Chaperone protein dnaK OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12
Identity = 40/114 (35.09%), Postives = 68/114 (59.65%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            +KITI N  G LS+DEI KMV++AE  +  D++ K++V+  N ++   ++   T+ D  +G KL  +DKK ++DA+D+  +  DSN +   +  ++K   LE     +  K+YQ
Sbjct:  464 QKITIQNP-GNLSEDEINKMVKDAESNEEADKKKKEEVDLHNQVDQLIFSSEKTLSD--VGDKLGDSDKKPVQDALDELKKAKDSNNI---ETLKEKKDALEKAAQALAVKLYQ 571          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_CAMJD (Chaperone protein dnaK OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=dnaK PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12
Identity = 40/114 (35.09%), Postives = 70/114 (61.40%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            ++I IT   G LS++EI  MV++AE +K ED++ K+ V+ +NA ++ A+ +  ++ +  +G K+  ADK+ I+ A+D   + L  NQ A  +E E KMK L  + + +   MY+
Sbjct:  491 QEIKITGSSG-LSEEEINNMVKDAELHKEEDKKRKEAVDVRNAADSLAHQVEKSLSE--LGEKVATADKENIQKALDDLRETL-KNQNASKEEIESKMKALSEVSHKLAENMYK 600          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_HELMI (Chaperone protein dnaK OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.073e-12
Identity = 40/114 (35.09%), Postives = 69/114 (60.53%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            +KITIT   G LSK+EIE+M+++AE +  ED + +++VE +N  ++  Y    T+KD  +G K + ADK KIE A ++  + L+   +   +E + K + L ++   +  K+YQ
Sbjct:  468 QKITITASTG-LSKEEIERMIKDAELHAEEDRKRQEEVEIRNQADSMVYQAEKTLKD--LGDKAEAADKAKIESAKEELKKALEGTDM---EEIKKKTEALTTVVYELSTKLYQ 575          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_DESRM (Chaperone protein dnaK OS=Desulfotomaculum reducens (strain MI-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 38/114 (33.33%), Postives = 65/114 (57.02%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            + I+IT   G LS DEI +MV EAEK+  ED++ K+ VE KN  ++  Y    T+KD  +G   D A  + ++ A+++    ++ N   + D  ++K++EL    + + A +YQ
Sbjct:  468 QSISITGGTGGLSDDEINRMVNEAEKFAEEDKKRKEAVEVKNQADSLIYQAEKTIKD--LGENADKAKVEAVQKAVEELRTAMNGN---DTDLIKNKLEELTKPLHELTADLYQ 576          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP75_ASHGO (Heat shock protein SSB OS=Ashbya gossypii GN=SSB PE=3 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.353e-11
Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = -1
Query:  348 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 617
            ITI+N  GRLS ++IEKMV +AE++KA DE   K+ EA+  LE+Y  ++  TV D  + +K+    K K+E A+  A   L   + +  D
Sbjct:  505 ITISNAIGRLSSEDIEKMVSQAEEFKAADEAFAKRHEARQRLESYVSSIEQTVSDPVLSAKMKKGAKSKVEAALADAFSALQIEESSAED 594          
The following BLAST results are available for this feature:
BLAST of CN185802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
DNAK_CAMJR7.174e-1335.96Chaperone protein dnaK OS=Campylobacter jejuni (st... [more]
DNAK_CAMJE7.174e-1335.96Chaperone protein dnaK OS=Campylobacter jejuni GN=... [more]
DNAK_CAMJ87.174e-1335.96Chaperone protein dnaK OS=Campylobacter jejuni sub... [more]
HSP75_CANGA1.598e-1248.15Heat shock protein SSB OS=Candida glabrata GN=SSB1... [more]
HSP75_KLUDE2.087e-1248.72Heat shock protein SSB OS=Kluyveromyces delphensis... [more]
DNAK_OENOB2.087e-1235.09Chaperone protein dnaK OS=Oenococcus oeni (strain ... [more]
DNAK_CAMJD2.087e-1235.09Chaperone protein dnaK OS=Campylobacter jejuni sub... [more]
DNAK_HELMI6.073e-1235.09Chaperone protein dnaK OS=Heliobacterium modestica... [more]
DNAK_DESRM7.932e-1233.33Chaperone protein dnaK OS=Desulfotomaculum reducen... [more]
HSP75_ASHGO1.353e-1140.00Heat shock protein SSB OS=Ashbya gossypii GN=SSB P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185802 ID=CN185802; Name=CN185802; organism=Citrus sinensis; type=EST; length=623bp
TTTTAGGGACTGAAAATATTCATTATATAAATTGGTCCGAATTACCAGTA
AAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATATTCATCCTAAGGCT
AAAGCAACATAAGATAAAAACCAAACGTCCAGTTTTCCCACCGTCAAAAA
ACCGACCTCCCACAAACACAGCAAAATAAACTGGAAGCTTAGTCAACTTC
CTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGGAGGAGTATCATCAT
CCATGTCACCGCCCATATCACCACCAGCACCTTGATACATCTTGGCAATG
ATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTGTCTTCAAATTCATC
GGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAATTGCCTGGTCAATGG
CATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTTTGGAGCCGATCTTC
TCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAGTTTTCCAAGGCATT
CTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTCAGCCTTGTACTTCT
CGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTGACAATCTACCCTTG
TCGTTGGTGATTGTGATCTTCCT
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