CN185802

Overview
NameCN185802
Unique NameCN185802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2889 contig Csv1_Contig2889:125..747. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.909e-35
Identity = 74/144 (51.39%), Postives = 101/144 (70.14%), Query Frame = -1
Query:  192 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAA-GPKIEEVD 620
            KITITNDKGRLSK+EIE+MVQEAE+YKA+DE  ++KV AKN LE+ A+NM++TV+ + +  K+   D+KKI D  +Q I W+++NQ+AE +E+E + KELE +CN II K+YQ                  GS++ GP IEEVD
Sbjct:  502 KITITNDKGRLSKEEIERMVQEAERYKADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQGGMPGGMPSGSSGAQARQGSSSTGPTIEEVD 645          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 5.106e-35
Identity = 68/113 (60.18%), Postives = 89/113 (78.76%), Query Frame = -1
Query:  282 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 620
            KITITNDKGRLSK++IE+MVQEAEKYK ED+  + KV +KN+LE+YA+NM++TV+DEK+  K+   DK KI +  ++ I WLD NQ AE +E+E   KELE +CNPII K+YQ
Sbjct:  500 KITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQ 612          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.668e-35
Identity = 74/150 (49.33%), Postives = 96/150 (64.00%), Query Frame = -1
Query:  192 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSA-------AGPKIEEVD 620
            +ITITNDKGRLSKDEIE+MV +A KY+A+D+    +VEAKN LENYAY+M+NT+ D  +  KLD  DK  +   I+ A++WL SNQ A  +E+E K KELE++CNPI+ KMYQ                    A       +GPK+EEVD
Sbjct:  503 QITITNDKGRLSKDEIERMVNDAMKYEADDKAQADRVEAKNGLENYAYSMKNTLGDSNVSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELENVCNPIMTKMYQSMGGGAGGMAGMPDMSSMSGARPAGGASSGPKVEEVD 652          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.668e-35
Identity = 65/113 (57.52%), Postives = 93/113 (82.30%), Query Frame = -1
Query:  282 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 620
            KITIT DKGRLSK+EIE+MV +AEK+K EDE+ + +V AKN LE+YA++M++TV+DEK+  K+  +D+++I +  ++ ++WLD NQ AE +E+E + KELES+CNPIIAKMYQ
Sbjct:  502 KITITRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQ 614          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 8.709e-35
Identity = 73/148 (49.32%), Postives = 100/148 (67.57%), Query Frame = -1
Query:  192 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSAA----GPKIEEVD 623
            +KITITNDKGRLSK+EI++MV EAEKYKAEDE    +++AKN LE+YAY++RN++ D  +  K+D +DK+ I+ A+ + I+WLD N  A  DE+EDK KELE + NPI+AK+YQ                  G+      GP++EEVD
Sbjct:  497 QKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIYQAGGAPGGAPGGMPGGAPGGAPGGADNGPEVEEVD 644          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 1.486e-34
Identity = 67/114 (58.77%), Postives = 91/114 (79.82%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            +KITITNDKGRLSK+EI++MV EAEKYKAEDE    +++AKN LE+YAY++RN++ D  +  K+D +DK+ ++ A+ + I+WLDSN  A  DEFE K KELES+ NPI+AK+YQ
Sbjct:  497 QKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP70_ALTAL (Heat shock 70 kDa protein (Fragment) OS=Alternaria alternata GN=HSP70 PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.486e-34
Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KI ITNDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKNALE+YAY++RNT+ D K+  KLD  DK+K+   ID+ +QWLD NQ A  DE+E + KELE + NPI+ K Y
Sbjct:    4 KIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEAARISAKNALESYAYSLRNTLSDSKVDEKLDAGDKQKLTAEIDKTVQWLDDNQTATKDEYESQQKELEGVANPIMMKFY 115          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.940e-34
Identity = 66/112 (58.93%), Postives = 86/112 (76.79%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KI ITNDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKN LE+YAY++RNT+ D K+  KLD +DK+K++  ID+ + WLD NQ A  +EFE + KELES+ NPI+ K Y
Sbjct:  499 KIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY 610          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.940e-34
Identity = 66/112 (58.93%), Postives = 86/112 (76.79%), Query Frame = -1
Query:  285 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 620
            KI ITNDKGRLSK+EIE+M+ EAEKYKAEDE    ++ AKN LE+YAY++RNT+ D K+  KLD +DK+K++  ID+ + WLD NQ A  +EFE + KELES+ NPI+ K Y
Sbjct:  497 KIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFY 608          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.322e-34
Identity = 71/147 (48.30%), Postives = 99/147 (67.35%), Query Frame = -1
Query:  192 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXGSA----AGPKIEEVD 620
            KITITNDKGRLSK++IEKMVQEAEKYKA+D+  +++V+AKNALE+YA+N+++ V+DE +  K+   DK+ I +   Q I WL++NQLAE +E+  + K+LE +C PII K+YQ                   +     +GP IEEVD
Sbjct:  501 KITITNDKGRLSKEDIEKMVQEAEKYKADDDAQRERVDAKNALESYAFNLKSMVEDENVKGKISDEDKRTISEKCTQVISWLENNQLAEKEEYAFQQKDLEKVCQPIITKLYQGGVPGGVPGGMPGSSCGAQARQGGNSGPTIEEVD 647          
The following BLAST results are available for this feature:
BLAST of CN185802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
HSP70_PLEWA3.909e-3551.39Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_ONCMY5.106e-3560.18Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HSP70_LEIAM6.668e-3549.33Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_ECHGR6.668e-3557.52Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP71_SCHPO8.709e-3549.32Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP72_SCHPO1.486e-3458.77Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP70_ALTAL1.486e-3459.82Heat shock 70 kDa protein (Fragment) OS=Alternaria... [more]
HSP72_PARBA1.940e-3458.93Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP71_PARBA1.940e-3458.93Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP70_XENLA4.322e-3448.30Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185802 ID=CN185802; Name=CN185802; organism=Citrus sinensis; type=EST; length=623bp
TTTTAGGGACTGAAAATATTCATTATATAAATTGGTCCGAATTACCAGTA
AAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATATTCATCCTAAGGCT
AAAGCAACATAAGATAAAAACCAAACGTCCAGTTTTCCCACCGTCAAAAA
ACCGACCTCCCACAAACACAGCAAAATAAACTGGAAGCTTAGTCAACTTC
CTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGGAGGAGTATCATCAT
CCATGTCACCGCCCATATCACCACCAGCACCTTGATACATCTTGGCAATG
ATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTGTCTTCAAATTCATC
GGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAATTGCCTGGTCAATGG
CATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTTTGGAGCCGATCTTC
TCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAGTTTTCCAAGGCATT
CTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTCAGCCTTGTACTTCT
CGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTGACAATCTACCCTTG
TCGTTGGTGATTGTGATCTTCCT
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