CN185798

Overview
NameCN185798
Unique NameCN185798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185798_ssr287 microsatellite CN185798_ssr287:287..301. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:89..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOPH (Chaperone protein dnaJ OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.325e-22
Identity = 75/241 (31.12%), Postives = 111/241 (46.06%), Query Frame = 2
Query:   65 SDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE----XXXXXXXAHDPFDI-XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLS-RNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            +D   YYE+LG+SK+AS D++KKAYRK A + HPD   GD     KFKE ++AY VLSDPEK+  +DQ+G  A ++             D  DI                         ++   ++++ E+   G  K+L LS ++                       G G     +     M++ +Q  C +C+GTG+ I  K++CP C G   I  KK ++V V  G+ NGQ I   G
Sbjct:    2 ADKRDYYEVLGISKSASDDEIKKAYRKLAKQYHPDANPGDQTAEAKFKEASEAYAVLSDPEKKRQFDQFGHAAFEQGGGGAGGFDFNMGDMGDIFGDIFGDIFGGGRRSRASNGPMNGANLRTAIRITFEEAVFGCEKELELSLKDECETCHGSGAKPGSSAETCHKCNGKGQVTFTQQSLFGMVRNVQ-TCPDCRGTGKII--KEKCPDCYGSGYISRKKKIQVSVPAGIDNGQSIRIRG 239          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_THIDA (Chaperone protein dnaJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.218e-21
Identity = 75/245 (30.61%), Postives = 107/245 (43.67%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHL--------GPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGV+KNAS +++KKAYRK A+K+HPD+  GD    +KFKE  QAYE+LSD +KR  YDQ+G    D                D                         D+ + L++ LE+   GT  K+ +                          GSG K   +          G   +QQ    +Q  C  C GTG+ ++D   CP C GE  +++ K L V +  G+ +G +I   G
Sbjct:    6 YYEVLGVAKNASDEEIKKAYRKLAMKHHPDRNPGDHAAEDKFKEAKQAYEILSDSDKRAAYDQFGHAGVDPQSGMGGGGFGGGGFSDAFSDIFGDIFGGGGGNRRDRVYRGADLRYNLEIGLEEAARGTETKIRI----------------PTLEECGTCHGSGAKPGTQPTTCSACGGHGQVRVQQGFFSVQQTCPRCGGTGKMVSDP--CPSCHGEGRVKKHKTLSVKIPAGVDSGDRIRLAG 232          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_PORG3 (Chaperone protein dnaJ OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.218e-21
Identity = 81/248 (32.66%), Postives = 111/248 (44.76%), Query Frame = 2
Query:   65 SDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA-----HDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVI-XXXXXXXXXXXXXXXXXXXXQGSGM--KVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            ++   YYE+LGVSKNA+ D+LKKAYRK AI+ HPDK  GD    E FKE+A+AY+VLSDPEKR  YDQ+G   L                D F                               D+   +K+SL D+  G  KK+ + + V+                      G+G+  +VS   LG     Q Q  C  C G GE I     C +CKGE V   ++V+   +  G+  G +++  G
Sbjct:    2 AEKRDYYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPEKRSRYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDLFGGFGGFGGFSDMGGSSRRRVRRGSDLRVRVKLSLADISKGVEKKVKVKKQVVCSKCRGDGTEEANGKTTCQTCHGTGVVTRVSNTFLG---AMQTQSTCPTCHGEGEIITKP--CSKCKGEGVEIGEEVISFHIPAGVAEGMQMSVNG 244          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_PELLD (Chaperone protein dnaJ OS=Pelodictyon luteolum (strain DSM 273) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.218e-21
Identity = 72/241 (29.88%), Postives = 105/241 (43.57%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA---------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVS++A +D++KKAYRK A+K HPDK  D     + FKE+ +AYEVLS+ +KR  YDQ+G   +                    D F                          D+   LK++LE++  G  K + + + V                      G+G    +R    +M  Q  +   C  C G G  +  KDRCP C GE + Q +  ++V V  G+Q G  +T  G
Sbjct:    5 YYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGGGQYGGGADFSDIFSAFNDMFGGGGGGSQRRRAASGIPGVDLKIRLKLTLEEIAKGVEKTIKIKKQVPCKECNGSGSKTGATETCPTCHGAG---EVRQASKTMFGQFVNIAACPTCGGEGRIV--KDRCPSCYGEGIKQGEVTVKVNVPAGVQEGNYLTLRG 240          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLP8 (Chaperone protein dnaJ OS=Chlorobaculum parvum (strain NCIB 8327) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.218e-21
Identity = 79/260 (30.38%), Postives = 110/260 (42.31%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQY-----GEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDV-----------------IH------PLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQH--PCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYEILGVS++A +D++KKAYRK A+K HPDK  D     EKFKE  +AYEVLS+ +KR  YDQ+     G  A               DI                       ED+                 IH       LK++LE++  G  K L + + V+                     GSG    +R    +M  Q  +   C  C G G+ +  KDRC  C GE + Q +  +++ V  G+Q+G  +T  G
Sbjct:    5 YYEILGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGPGGFGGGGYADINDIFEMFTGGGRARGGGSPFSGFEDIFGGGFSGGGGRRARSTGIHGTDLKIRLKLTLEEIAKGVEKTLKIKKQVVCSECNGTGSKSGKTETCQTCHGSG---EVRQASKTMFGQFVNIVACPTCGGEGQVV--KDRCTSCYGEGIKQGEVTVKINVPAGVQDGNYLTLQG 259          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAMM (Chaperone protein dnaJ OS=Anaplasma marginale (strain St. Maries) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.218e-21
Identity = 76/235 (32.34%), Postives = 105/235 (44.68%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF-----DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYEIL VS+NAS +++KK+YRK   K HPDK  GD    EKFK++++AYEVLS+PEKR  YD+YG                 F     DI                        D+ + ++VSLED + G    +S   NV                           V  R  G   I+++   CN C G GE I  K++C +C G   ++ +  L V V KG++ G K+   G
Sbjct:    6 YYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPEKRAAYDRYGHSTFTSGGASGFDFTSGFSTDFSDIFQDFFGGGFGKSQRASSREHLRGSDLRYDVEVSLEDAFKGIKVPISYVTNVKCSSCSGIGSEGAVNSVKCGNCNGAGSVRTRK-GFLTIEEV---CNVCNGEGEVI--KNKCRRCGGSGRVRNEVSLLVTVPKGIETGNKVRVNG 234          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ANAMF (Chaperone protein dnaJ OS=Anaplasma marginale (strain Florida) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.218e-21
Identity = 76/235 (32.34%), Postives = 105/235 (44.68%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF-----DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYEIL VS+NAS +++KK+YRK   K HPDK  GD    EKFK++++AYEVLS+PEKR  YD+YG                 F     DI                        D+ + ++VSLED + G    +S   NV                           V  R  G   I+++   CN C G GE I  K++C +C G   ++ +  L V V KG++ G K+   G
Sbjct:    6 YYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPEKRAAYDRYGHSTFTSGGASGFDFTSGFSTDFSDIFQDFFGGGFGKSQRASSREHLRGSDLRYDVEVSLEDAFKGIKVPISYVTNVKCSSCSGIGSEGAVNSVKCGNCNGAGSVRTRK-GFLTIEEV---CNVCNGEGEVI--KNKCRRCGGSGRVRNEVSLLVTVPKGIETGNKVRVNG 234          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_RICAH (Chaperone protein dnaJ OS=Rickettsia akari (strain Hartford) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.591e-21
Identity = 73/239 (30.54%), Postives = 107/239 (44.77%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YY+ILGVSK ASQ DLKKAY K A + HPD   D +   KFKE+ +AY+VL D +KR  YD++G D  +               HD  DI                        D+ + L ++LE+ ++G  K +S S  V                      G         +G + IQQ    ++  C++CKG G+ I  K+ C +C G     +++ L V +  G++NG +I   G
Sbjct:    5 YYKILGVSKTASQADLKKAYLKLAKQYHPDTTDDKDAEKKFKEINRAYDVLKDEQKRAAYDRFGHDTFQNQQSRGGGGSHAGFHHDINDIFGDFFSDFMGGGRRKPTSSKARGSDLKYDLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACGG--------VGATRIQQGFFTIEQACHKCKGNGQII--KNPCKKCHGMGRCHKQRNLSVNIPAGVENGTRIRHTG 233          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAD (Chaperone protein dnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.591e-21
Identity = 73/244 (29.92%), Postives = 106/244 (43.44%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI--XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     +KFKE ++AYEVLSD EKR +YD+ G +A +             DI                          D+ + +++SLE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+ C  C G  V   ++ LEV +  G+ NG ++   G
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEDKFKEASEAYEVLSDSEKRSMYDRMGHNAFEGGGGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQQRQRRGSDLRYVMELSLEEAVRGVKKTITFT----------------APAPCEVCDGKGSKNPNDVETCRTCHGTGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCQSCHGSGVADRQQTLEVTIPAGVDNGDRVRLSG 231          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_EHRRW (Chaperone protein dnaJ OS=Ehrlichia ruminantium (strain Welgevonden) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.077e-21
Identity = 80/256 (31.25%), Postives = 121/256 (47.27%), Query Frame = 2
Query:   62 KSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE------XXXXXXXAHDPFDI--XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHL--------GPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            KSD   YY++LG+SKNA+ +++KKAYRK A+K HPDK  GD    EKFKEL++AY+VL D +KR  YD+YG  A  +             + D  DI                          D+   ++++LED +NGT   ++   +V                      GSG + S++ +        G    QQ    ++  C+ C G GE I  K++C +C G   ++++  L V V KG+++G KI   G
Sbjct:    3 KSD---YYDLLGLSKNATPEEIKKAYRKMALKYHPDKNPGDKAAEEKFKELSEAYDVLIDKDKRAAYDRYGHSAFSDGSGRGGFDFNSGFSTDFSDIFNDLFGGGFRGGRSSSKRQDGGTVGSDLRLDIEITLEDSFNGTKVPINYVTHV----------------KCSSCSGSGSEGSVKSVQCNTCHGAGNIRTQQGFFTIERTCHVCNGEGEII--KNKCKKCSGSGRVRDEVNLLVTVPKGIESGDKIRLNG 237          
The following BLAST results are available for this feature:
BLAST of CN185798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CLOPH9.325e-2231.12Chaperone protein dnaJ OS=Clostridium phytoferment... [more]
DNAJ_THIDA1.218e-2130.61Chaperone protein dnaJ OS=Thiobacillus denitrifica... [more]
DNAJ_PORG31.218e-2132.66Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNAJ_PELLD1.218e-2129.88Chaperone protein dnaJ OS=Pelodictyon luteolum (st... [more]
DNAJ_CHLP81.218e-2130.38Chaperone protein dnaJ OS=Chlorobaculum parvum (st... [more]
DNAJ_ANAMM1.218e-2132.34Chaperone protein dnaJ OS=Anaplasma marginale (str... [more]
DNAJ_ANAMF1.218e-2132.34Chaperone protein dnaJ OS=Anaplasma marginale (str... [more]
DNAJ_RICAH1.591e-2130.54Chaperone protein dnaJ OS=Rickettsia akari (strain... [more]
DNAJ_ACIAD1.591e-2129.92Chaperone protein dnaJ OS=Acinetobacter sp. (strai... [more]
DNAJ_EHRRW2.077e-2131.25Chaperone protein dnaJ OS=Ehrlichia ruminantium (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185798 ID=CN185798; Name=CN185798; organism=Citrus sinensis; type=EST; length=759bp
GAGGCTACTCTGAAGATCTGAAATTTTTTAGTACAAGAAGATGTTCGGAA
GAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGTC
TCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCGC
CATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAGT
TGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATAT
GATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGTGG
TGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCAT
TTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGACGTA
ATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAATGGGACATCTAA
GAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAGG
GGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGGA
ATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGCA
GCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAGG
ATCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAGTC
TTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGTT
CCCTGGAGA
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