CN185798

Overview
NameCN185798
Unique NameCN185798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185798_ssr287 microsatellite CN185798_ssr287:287..301. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:89..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_PORGI (Chaperone protein dnaJ OS=Porphyromonas gingivalis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.713e-21
Identity = 80/248 (32.26%), Postives = 111/248 (44.76%), Query Frame = 2
Query:   65 SDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA-----HDPFD-----IXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVI-XXXXXXXXXXXXXXXXXXXXQGSGM--KVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            ++   YYE+LGVSKNA+ D+LKKAYRK AI+ HPDK  GD    E FKE+A+AY+VLSDP+KR  YDQ+G   L                D F                               D+   +K+SL D+  G  KK+ + + V+                      G+G+  +VS   LG     Q Q  C  C G GE I     C +CKGE V   ++V+   +  G+  G +++  G
Sbjct:    2 AEKRDYYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPQKRSQYDQFGHAGLGGAAGGGFSGGGMSMEDIFSRFGDLFGGFGGFGGFSDMGGGSRRRVRRGSDLRVRVKLSLADISKGVEKKVKVKKQVVCSKCRGDGTEEANGKTTCQTCHGTGVVTRVSNTFLG---AMQTQSTCPTCHGEGEIITKP--CSKCKGEGVEIGEEVISFHIPAGVAEGMQMSVNG 244          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_DICNV (Chaperone protein dnaJ OS=Dichelobacter nodosus (strain VCS1703A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.628e-21
Identity = 71/243 (29.22%), Postives = 112/243 (46.09%), Query Frame = 2
Query:   83 YEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF-DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRH--------LGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            Y ILGV + A+QD++KKAYRK ++K HPD+  +      EKFKE+ +AYE+LSD +KR  YD++G DA  +       +   F DI                        D+ + +++SLE+  +G  K++ ++  V                      GSGM    +          G   +QQ    +  PC  C G GE I  ++ C +C+G   +++ +VL V +  G+ NG +I   G
Sbjct:    7 YAILGVCRTANQDEIKKAYRKLSMKWHPDRNPNNKEEAEEKFKEINKAYEILSDSQKRASYDRFGFDAANQGAAGGGFSGGNFSDIFGDVFGDIFGNVRQTNGARQTRGHDLAYKIELSLEEAIHGVEKQIRIATQV----------------RCGECHGSGMNAKSKKKTCPTCNGAGQVRMQQGFFSIAQPCPTCHGRGEII--ENPCNKCQGTGRVKDTRVLTVNIPAGVDNGDRIRLSG 231          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_THISH (Chaperone protein dnaJ OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21
Identity = 72/234 (30.77%), Postives = 104/234 (44.44%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYEILGV+KNAS+ +LKKA+R+ A+K+HPD+  GD    EKFKE  +AYE+L+DP+KR  YDQ+G   +             F                          D+ + L+++LE+   GT  K+ +   V                      G         +G   +QQ    +Q  C  C GTG+ I     C  C G+  ++E K L V V  G+ +G +I   G
Sbjct:    6 YYEILGVAKNASEAELKKAFRRLAMKHHPDRNPGDKESEEKFKEAKEAYEILTDPQKRAAYDQFGHAGVDPSAGGGARGGASFSDIFEDIFGDIFGGGRGGGSRVYRGSDLQYNLELTLEEAVFGTEVKIRVPSLVECGECHGSGAEKGTTPETCGTCGG--------VGQVRMQQGFFSVQQTCPRCHGTGKMITHP--CKACHGQGRVEEHKTLSVKVPAGVDSGDRIRLSG 229          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_THEVO (Chaperone protein dnaJ OS=Thermoplasma volcanium GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21
Identity = 73/240 (30.42%), Postives = 108/240 (45.00%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPD-----KGGDPEKFKELAQAYEVLSDPEKREIYDQY--------GEDALKEXXXXXXXAHDPF-DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YY+ILGV +NAS++D+KKA+R+ A K HPD     K    EKFKE+++AYEVLSDPEKR IYDQ         G +   +        +D F +I                        D+   L +SLE+ Y GT K++   RN I                     G+G +  +R  G   +  +   CN C G G     +++CP+C G   I   + + V + +G  +  ++   G
Sbjct:    5 YYKILGVDRNASEEDIKKAFRELAKKWHPDLHPDNKAEAEEKFKEISEAYEVLSDPEKRRIYDQTGSVDFGGGGSNFNWDNFTHFSDINDIFNEIFGGNFGSDFFSGFGNRQSTRNIDLDMYTNLDISLEEAYYGTEKRIKFRRNAICPDCKGTGAKNGKLITCPTCHGTGQQRVVRGQGFFRMVTVT-TCNTCGGKGRI--PEEKCPRCNGTGTIVVDEDITVKIPRGATDNLRLRVSG 241          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21
Identity = 74/248 (29.84%), Postives = 108/248 (43.55%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI------------XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQ------HPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS D++K AYRK AIK HPDK  GD    EKFKE  +AYEVL DP+KR+ YDQ+G+  +         A    D                                     D+ + L+VSLED   G   K+ + R                       +GS   V     G   +++ Q        C  CKG G+ I++   C  CKGE + ++++ + + +  G+++G ++   G
Sbjct:    6 YYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPR----------LETCVDCTGSGASKGSSPTVCPDCSGTGQVRRTQGFFSVTTTCPRCKGKGKVISNP--CKTCKGEGLTEKRRTIHIKIPAGVESGSRLKVSG 241          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBA (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21
Identity = 74/248 (29.84%), Postives = 108/248 (43.55%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDI------------XXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQ------HPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS D++K AYRK AIK HPDK  GD    EKFKE  +AYEVL DP+KR+ YDQ+G+  +         A    D                                     D+ + L+VSLED   G   K+ + R                       +GS   V     G   +++ Q        C  CKG G+ I++   C  CKGE + ++++ + + +  G+++G ++   G
Sbjct:    6 YYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPR----------LETCVDCTGSGASKGSSPTVCPDCSGTGQVRRTQGFFSVTTTCPRCKGKGKVISNP--CKTCKGEGLTEKRRTIHIKIPAGVESGSRLKVSG 241          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDB (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21
Identity = 72/240 (30.00%), Postives = 108/240 (45.00%), Query Frame = 2
Query:   71 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALK-------EXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            N  YY++LGVS++AS  ++ KAYRK A K HPD   + G  EK+KE+ +AYEVL DP+KR+ YDQ+G+  +        +         D  D                         D+ + + +   D   G + ++S SR+                        GSGM    +     MIQ+ Q  C++C G+G  I  +  C  C G+ V  +K+ L+V V  G+ NGQ+I   G
Sbjct:    4 NRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGMNGQGGFGGQYGGQGFGGADFGDFGDIFSSFFGGARQQVDPTAPQRGADLDYTMTIDFMDAIKGKTSEISYSRSTTCEVCKGSGAEKGTHPITCDKCGGSGMMTITQRSVLGMIQR-QTTCDKCAGSGVII--QHPCHNCHGKGVKTQKQTLQVKVPAGIDNGQQIRLAG 240          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDA (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21
Identity = 72/240 (30.00%), Postives = 108/240 (45.00%), Query Frame = 2
Query:   71 NTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALK-------EXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRN-VIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            N  YY++LGVS++AS  ++ KAYRK A K HPD   + G  EK+KE+ +AYEVL DP+KR+ YDQ+G+  +        +         D  D                         D+ + + +   D   G + ++S SR+                        GSGM    +     MIQ+ Q  C++C G+G  I  +  C  C G+ V  +K+ L+V V  G+ NGQ+I   G
Sbjct:    4 NRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGMNGQGGFGGQYGGQGFGGADFGDFGDIFSSFFGGARQQVDPTAPQRGADLDYTMTIDFMDAIKGKTSEISYSRSTTCEVCKGSGAEKGTHPITCDKCGGSGMMTITQRSVLGMIQR-QTTCDKCTGSGVII--QHPCHNCHGKGVKTQKQTLQVKVPAGIDNGQQIRLAG 240          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21
Identity = 76/237 (32.07%), Postives = 106/237 (44.73%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE----KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK-VSIRH------LGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            +Y+ILGV+KNA+ + +KKAYRK A + HPD+  D E    KF++L+ AYEVLSD EKR +YD++GE+ + +        HDPF                          DV   L V+LE++YNG   ++   + V                     Q SG +  + RH      +G    Q  Q                  C +C   K++QE KVLEV VE G  NG +  F G
Sbjct:   25 FYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQDLSSAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFS--SFFGDFFGGGGGHGGEEGTPKGADVTIDLFVTLEEVYNGHFVEIKRKKAV-------------------YKQTSGTRQCNCRHEMRTEQMGQGRFQMFQVKV---------------CDECPNVKLVQENKVLEVEVEVGADNGHQQIFHG 225          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_UREPA (Chaperone protein dnaJ OS=Ureaplasma parvum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21
Identity = 74/232 (31.90%), Postives = 104/232 (44.83%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPD--KGGDPEKFKELAQAYEVLSDPEKREIYDQYGED-------ALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNV-IXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKI 745
            YYEILGVSK+A+ +++K A+RK A ++HPD  K  D   FKE+ +AYEVLSD +KR  YDQ+G D       A              FDI                        D+   L +   +  NG SK ++  R +                       G G  +   H     IQQ +  C+EC+GTG+  + K  C QC G+KVI E+  L V +  G + G+K+
Sbjct:    6 YYEILGVSKSATPEEIKAAFRKLAKEHHPDRNKSADDTLFKEINEAYEVLSDSKKRAQYDQFGHDGPQGFSSASGFSGFSGGFGGVDFDINDIFGSFFNNASSSHNSSNQYETYDIHLRLHLDFMEAVNGISKNINYDRKITCHKCQGTGAKDPKDVKICTKCHGRGTSIENVHSLFGTIQQ-EVECHECEGTGKVASSK--CEQCYGKKVINERVNLTVEIPAGTREGEKL 234          
The following BLAST results are available for this feature:
BLAST of CN185798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PORGI2.713e-2132.26Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNAJ_DICNV4.628e-2129.22Chaperone protein dnaJ OS=Dichelobacter nodosus (s... [more]
DNAJ_THISH6.045e-2130.77Chaperone protein dnaJ OS=Thioalkalivibrio sp. (st... [more]
DNAJ_THEVO6.045e-2130.42Chaperone protein dnaJ OS=Thermoplasma volcanium G... [more]
DNAJ_LEPBP6.045e-2129.84Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LEPBA6.045e-2129.84Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LACDB6.045e-2130.00Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNAJ_LACDA6.045e-2130.00Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNJ20_CAEEL7.894e-2132.07DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
DNAJ_UREPA7.894e-2131.90Chaperone protein dnaJ OS=Ureaplasma parvum GN=dna... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185798 ID=CN185798; Name=CN185798; organism=Citrus sinensis; type=EST; length=759bp
GAGGCTACTCTGAAGATCTGAAATTTTTTAGTACAAGAAGATGTTCGGAA
GAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGTC
TCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCGC
CATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAGT
TGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATAT
GATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGTGG
TGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCAT
TTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGACGTA
ATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAATGGGACATCTAA
GAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAGG
GGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGGA
ATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGCA
GCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAGG
ATCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAGTC
TTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGTT
CCCTGGAGA
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