CN185798

Overview
NameCN185798
Unique NameCN185798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185798_ssr287 microsatellite CN185798_ssr287:287..301. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:89..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: XDJ1_YEAST (DnaJ protein homolog XDJ1 OS=Saccharomyces cerevisiae GN=XDJ1 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 70/253 (27.67%), Postives = 106/253 (41.90%), Query Frame = 2
Query:   77 KYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE-------KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDP---------FDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVI------XXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETI----NDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            + Y++LGV+++A+  ++K AYRK A+K+HPDK  D +       KFKE+  AYE+LSDPEK+  YD YG+D             D          F+                        +D+   + ++L+DLY G   K  L R VI                           G G K  ++  GP ++      C +C G G+      N K+ CP C G  ++ +K+++ V V  G      IT  G
Sbjct:    9 RLYDVLGVTRDATVQEIKTAYRKLALKHHPDKYVDQDSKEVNEIKFKEITAAYEILSDPEKKSHYDLYGDDNGAASSGGANGFGDEDFMNFFNNFFNNGSHDGNNFPGEYDAYEEGNSTSSKDIDIDISLTLKDLYMGKKLKFDLKRQVICIKCHGSGWKPKRKIHVTHDVECESCAGKGSKERLKRFGPGLVASQWVVCEKCNGKGKYTKRPKNPKNFCPDCAGLGLLSKKEIITVNVAPGHHFNDVITVKG 261          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_HAMD5 (Chaperone protein dnaJ OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 73/241 (30.29%), Postives = 110/241 (45.64%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYEILG++KNA++ D+K AY++ A K HPD+  D +   KFKE+ +AYEVLSD +KR  YDQ+G  A  E        H+  +                         D+ + L ++LE+   G SK++ ++  V                     +GSG K         + R +G   +QQ    +Q  C  C G G+ I  KD C QC+G+  ++E K   V V  G+ +   +   G
Sbjct:    6 YYEILGIAKNANEQDIKDAYKRLAKKYHPDRNKDKDAETKFKEMKEAYEVLSDQQKRAAYDQHGHTAF-EQSGMGGGFHNSSNF-SNVFNDVFSDFFGGHQQRTQRGRDLRYTLNLTLEEAVRGASKEIHITTLV----------------HCEHCKGSGAKQGTRPVTCTTCRGVGEVHMQQGFFTIQQTCPRCHGQGQMI--KDPCRQCRGQGKVEEPKTFSVKVPAGIDSNDCLRLNG 226          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBY (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AYE) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 71/246 (28.86%), Postives = 106/246 (43.09%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+ C  C G  V   ++ LEV +  G+ NG ++   G
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRVRLSG 233          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBT (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 71/246 (28.86%), Postives = 106/246 (43.09%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+ C  C G  V   ++ LEV +  G+ NG ++   G
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRVRLSG 233          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBS (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain SDF) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 71/246 (28.86%), Postives = 106/246 (43.09%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+ C  C G  V   ++ LEV +  G+ NG ++   G
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRVRLSG 233          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIBC (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain ACICU) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 71/246 (28.86%), Postives = 106/246 (43.09%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+ C  C G  V   ++ LEV +  G+ NG ++   G
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRVRLSG 233          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB5 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB0057) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 71/246 (28.86%), Postives = 106/246 (43.09%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+ C  C G  V   ++ LEV +  G+ NG ++   G
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRVRLSG 233          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIB3 (Chaperone protein dnaJ OS=Acinetobacter baumannii (strain AB307-0294) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20
Identity = 71/246 (28.86%), Postives = 106/246 (43.09%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXE----DVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS D++KKAYRK A+K HPD+  D     EKFKE ++AYE+LSD EKR +YD+ G +A +            F                         +    D+ + ++++LE+   G  K ++ +                         G G K         +    G   +QQ    +Q  C  C+G G+ I  K+ C  C G  V   ++ LEV +  G+ NG ++   G
Sbjct:    6 YYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDSEKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDLRYVMELTLEEAVKGVKKTITFT----------------APAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFFSVQQTCGTCRGQGKII--KNPCHACHGSGVADRQQTLEVTIPAGVDNGDRVRLSG 233          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEFS (Chaperone protein dnaJ OS=Pseudomonas fluorescens (strain SBW25) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 76/245 (31.02%), Postives = 104/245 (42.45%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGE---DALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKV--------SIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGV + +S+ DLKKAYR+ A+K+HPD+  D     E FKE  +AYE LSDP KR  YDQYG    D             +  DI                        D+ + L+++LE+   GTS  + +   V                      GSG K         +   +G   +QQ    +Q  C  C G G+ I+D   C  C GE  ++E K L V V  G+  G +I   G
Sbjct:    6 YYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDSKESEEMFKEANEAYECLSDPNKRAAYDQYGHAGVDPSMGGGGAGFGGQNFSDIFGDVFSDFFGGGRGGQRGGAQRGSDLRYTLELNLEEAVRGTSVNIRVPTLV----------------NCKPCDGSGAKKGSSPITCPTCGGIGQVRMQQGFFSVQQTCPRCHGQGKIISDP--CDSCHGEGRVEEYKTLSVKVPAGVDTGDRIRLSG 232          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOLL (Chaperone protein dnaJ OS=Photorhabdus luminescens subsp. laumondii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 72/231 (31.17%), Postives = 112/231 (48.48%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK AS+ ++KKAY++ A+K HPD+  GD E   +FKE+ +AYE+L+D +KR  YDQYG  A ++       A D  DI                        D+ + ++++LE+   G +K++ + +                        QG+G +V +R  G   +QQ   PC  C G G+ I  KD C +C G   ++  K L V +  G+  G ++   G
Sbjct:    6 YYEVLGVSKTASEKEIKKAYKRLAMKYHPDRNQGDKEAESQFKEVKEAYEILTDDQKRAAYDQYGHAAFEQGGMGGGGA-DFSDI--FGDVFGDIFGGGRRQQRPSRGADLRYSMELTLEEAVRGVTKEIRIPTLETCDICHGSGAKAGTSPVTCSTCQGAG-QVHMRQ-GFFTVQQ---PCPHCHGRGQII--KDSCHKCHGHGRVERYKTLSVKIPAGVDTGDRVRLSG 226          
The following BLAST results are available for this feature:
BLAST of CN185798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
XDJ1_YEAST1.031e-2027.67DnaJ protein homolog XDJ1 OS=Saccharomyces cerevis... [more]
DNAJ_HAMD51.031e-2030.29Chaperone protein dnaJ OS=Hamiltonella defensa sub... [more]
DNAJ_ACIBY1.031e-2028.86Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBT1.031e-2028.86Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBS1.031e-2028.86Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIBC1.031e-2028.86Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB51.031e-2028.86Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_ACIB31.031e-2028.86Chaperone protein dnaJ OS=Acinetobacter baumannii ... [more]
DNAJ_PSEFS1.347e-2031.02Chaperone protein dnaJ OS=Pseudomonas fluorescens ... [more]
DNAJ_PHOLL1.347e-2031.17Chaperone protein dnaJ OS=Photorhabdus luminescens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185798 ID=CN185798; Name=CN185798; organism=Citrus sinensis; type=EST; length=759bp
GAGGCTACTCTGAAGATCTGAAATTTTTTAGTACAAGAAGATGTTCGGAA
GAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGTC
TCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCGC
CATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAGT
TGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATAT
GATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGTGG
TGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCAT
TTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGACGTA
ATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAATGGGACATCTAA
GAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAGG
GGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGGA
ATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGCA
GCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAGG
ATCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAGTC
TTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGTT
CCCTGGAGA
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