CN185798

Overview
NameCN185798
Unique NameCN185798
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185798_ssr287 microsatellite CN185798_ssr287:287..301. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:89..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 70/232 (30.17%), Postives = 106/232 (45.69%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA--HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYEIL +SK AS  ++K+AYRK A+K HPD+  GD E   KFKE+++AYE+LSD  KR  YDQ+G   + +           D FD                         D+ + L+++LE+ + G  K++++ R                        G G   +IR          +  C  C GTG +I D   C  C G   ++++K L+V + +G+ NG +I   G
Sbjct:    6 YYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTGGFEDIFD-----TFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG---TIRR--QQGFFAFEQTCPVCNGTGYSITDP--CDACYGNGKVKKQKTLKVKIPEGVDNGDRIRLQG 225          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATH (Chaperone protein dnaJ OS=Francisella tularensis subsp. holarctica (strain LVS) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 70/232 (30.17%), Postives = 106/232 (45.69%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA--HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYEIL +SK AS  ++K+AYRK A+K HPD+  GD E   KFKE+++AYE+LSD  KR  YDQ+G   + +           D FD                         D+ + L+++LE+ + G  K++++ R                        G G   +IR          +  C  C GTG +I D   C  C G   ++++K L+V + +G+ NG +I   G
Sbjct:    6 YYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQQSGFGGTGGFEDIFD-----TFFGGGTSRGSNRSRASRGSDLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG---TIRR--QQGFFAFEQTCPVCNGTGYSITDP--CDACYGNGKVKKQKTLKVKIPEGVDNGDRIRLQG 225          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_BACA2 (Chaperone protein dnaJ OS=Bacillus amyloliquefaciens (strain FZB42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 65/232 (28.02%), Postives = 103/232 (44.40%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXA---HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK+AS+D++KKAYRK + K HPD   + G  EKFKE+ +AYE LSD +KR  YDQ+G     +              F                          D+ + + +S ED   G    + + R                        G   ++++    P      +  C+ C+GTG+ I  K++C  C G   ++++K + V +  G+ +GQ++  PG
Sbjct:    6 YYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYDQFGHTDPNQGFGGGFGGGGDFGGFGFDDIFSSIFGGGTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETIIEIPREENCETCKGSGAKPGTKPDTCSHCGGSGQLNVEQNTPFGKVVNRRVCHHCEGTGKII--KNKCSDCGGTGKVKKRKKINVTIPAGVDDGQQLRVPG 235          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_ACISJ (Chaperone protein dnaJ OS=Acidovorax sp. (strain JS42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.000e-20
Identity = 73/237 (30.80%), Postives = 109/237 (45.99%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD-----PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPF----DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSL-SRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            +YE+LGV KNAS D++KKAYRK A+K HPD+  GD      EKFKE  +AYE+LSD +KR  YDQYG   +           + F    +                         D+ + ++++LE+   G   ++ + S                        QGSG  V +R  G   +QQ    C  C+GTG+ I   + C  C G+  ++++K LEV +  G+ +G +I   G
Sbjct:    6 FYEVLGVPKNASDDEIKKAYRKLAMKYHPDRNQGDAAKPAEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPNMRGGMGGAEGFGGFAEAFGDIFGDMFGGARGRGGRQVYRGNDLSYAMEITLEEAAKGKEAQIRIPSWESCETCHGSGAKPGTSAKTCGTCQGSG-TVQMRQ-GFFSVQQ---TCPHCRGTGKII--PEPCTACHGQGRVKKQKTLEVKIPAGIDDGMRIRSTG 235          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: YR260_MIMIV (DnaJ-like protein R260 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R260 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 70/235 (29.79%), Postives = 110/235 (46.81%), Query Frame = 2
Query:   68 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKD-RCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            ++T  YEILG++ +AS++D+KKAYRK AIK HPDK  G+P   E FK++  A  +LS+ EKR +YDQYGE+A+         + DP  +                              ++SL+D +   + K++++ +                      +G G+ V+    GP  IQQ+Q  C+ C+G       KD  CP CKG  + + ++  EV V   +    K+   G
Sbjct:    4 ESTDLYEILGLTPSASEEDIKKAYRKLAIKYHPDKNKGNPEAEEMFKKINHANSILSNSEKRRVYDQYGEEAVNN--GLNEDSFDPMSMFMRMHQPGNKKLRAQMRH------------QISLQDYFTKKTVKVTITVDSKCDDCDATGFSDKQKHVCKVCRGKGIVVNEIRNGP-FIQQIQQHCHGCQGKKYDTTAKDLHCPSCKGAGINKSEEETEVNVPFDILRNPKVILEG 223          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_TREDE (Chaperone protein dnaJ OS=Treponema denticola GN=dnaJ PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 75/250 (30.00%), Postives = 108/250 (43.20%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGE---DALKEXXXXXXXA------------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFP 754
            YYE+LGV K AS DD+KKAYRK AIK HPDK  GD    EKFKE  +AYE+L D +KR +YDQ+G    D +         A             D F+                         ++ + L++S  D   G   +LS +RN                       GS  ++     G   ++Q      +  PC  C G G  I  +  C +C G  + ++K+ + V +  G++NG++IT P
Sbjct:    8 YYEVLGVDKKASNDDIKKAYRKLAIKYHPDKNQGDKAAEEKFKEATEAYEILIDEKKRSMYDQFGHAGVDGMSGGGGYDPSAFQGFEDIFGGSFSDIFENLFGGGFSSRSSGFGGRHAGPVRGSNLRYDLQISFVDAVYGKKAELSYTRN----------EKCSECHGTGSESGSSKRMCPDCKGTGQVRQSTGFFSISRPCPTCGGEGSII--EKPCKKCGGNGLERKKQRIIVTIPAGVENGKRITIP 245          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_STRA1 (Chaperone protein dnaJ OS=Streptococcus agalactiae serotype Ia GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 69/234 (29.49%), Postives = 111/234 (47.44%), Query Frame = 2
Query:   68 DNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSR-NVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            +NT++Y+ LGVSK+ASQD++KKAYR+ + K HPD   + G  EK+KE+ +AYE LSD +KR  YDQYG  A              F                         +D+ + + +S E+   G  K++S +R +                       GSG+ +++    P    + Q  C+ C+G+G+ I  K++CP C G    ++   + V +  G++ GQ+I   G
Sbjct:    2 NNTEFYDRLGVSKDASQDEIKKAYRRMSKKYHPDINKEAGAEEKYKEVQEAYETLSDTQKRAAYDQYG--AAGANGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPRQGDDLQYRVNLSFEEAIFGAEKEVSYNRESSCHTCSGSGAKPGTSPVTCQKCHGSGV-INVDTQTPLGTMRRQVTCDVCQGSGQEI--KEKCPTCHGTGHEKKTHKVSVKIPAGVETGQQIRLTG 230          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEHT (Chaperone protein dnaJ OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 70/242 (28.93%), Postives = 108/242 (44.63%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDK-GGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKE-----XXXXXXXAHDPF-DIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVSIRHLGPSMIQQ------MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGVSK+AS+ D+KKAY++ A+K HPD+  GD E   KFKE+ +AYE+L+D +KR+ YDQYG  A ++             H  F D+                        D+ + + +SLE+   G   ++ +   V                      GS  K      G   +Q       +Q  C  C+G G+ I++   C  C G+  +++ K L V +  G+  G +I   G
Sbjct:    6 YYEVLGVSKDASERDIKKAYKRLAMKYHPDRTSGDKELETKFKEVKEAYEILTDAQKRQTYDQYGHAAFEQGGGGGGHGGFGGGHGDFGDVFGDVFGDIFGGGGGRRQSRQQRGSDLRYNMDLSLEEAVRGKEVEIKIPTWV----------GCDPCDGSGAKAGSKPKTCTTCHGAGQVQMRQGFFAVQQTCPTCQGQGQIISNP--CDSCHGQGRVEKTKTLSVKIPAGVDTGDRIRLTG 235          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_BLOFL (Chaperone protein dnaJ OS=Blochmannia floridanus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 76/249 (30.52%), Postives = 112/249 (44.98%), Query Frame = 2
Query:   62 KSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEXXXXXXXAH-DPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMKVS------IRHLGPSMIQ------QMQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            KSD   YYEILGVSKNA + ++KK+Y++ A+K HPD+  GD     KFKE+ +AYEVLS+PEKR  YDQYG    ++       ++    D                         D+ + +++SLE+   G  +++ +   V                     +GSG K S      +   G   IQ       +Q  C  C G G+ I  K+ C +C+G   I+  K L V +  G+  G +I   G
Sbjct:    3 KSD---YYEILGVSKNADEREIKKSYKRLAMKFHPDRNPGDVSAESKFKEIKEAYEVLSNPEKRSAYDQYGHAIFEQNSGGMGGSNTGGSDFSDIFGDVFGDIFGGSRRSRSRRGSDLRYDIELSLEEAVKGVVREICVPTLV----------------TCLQCRGSGAKSSASIVSCVTCHGHGQIQMRQGFFSVQQSCPSCNGHGKII--KEICNKCRGSGRIERTKTLSVKIPAGVSTGDRIRLSG 230          
BLAST of CN185798 vs. ExPASy Swiss-Prot
Match: DNAJ_AZOVD (Chaperone protein dnaJ OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.918e-20
Identity = 74/246 (30.08%), Postives = 108/246 (43.90%), Query Frame = 2
Query:   80 YYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGD----PEKFKELAQAYEVLSDPEKREIYDQYG----EDALKEXXXXXXXAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVIHPLKVSLEDLYNGTSKKLSLSRNVIXXXXXXXXXXXXXXXXXXXXQGSGMK--------VSIRHLGPSMIQQ----MQHPCNECKGTGETINDKDRCPQCKGEKVIQEKKVLEVIVEKGMQNGQKITFPG 757
            YYE+LGV + A + +LKKAYR+ A+K HPD+  D     EKFKE+ +AYEVLSD  KR  YDQYG    + ++           +  DI                        D+ + L+++LE+   GT+  + +   V                      GSG K         +   +G   +QQ    +Q  C  C G+G+ I   D CP C G+  ++E K L V V  G+ +G +I   G
Sbjct:    6 YYEVLGVERGAGEAELKKAYRRLAMKYHPDRNPDDKSAEEKFKEVNEAYEVLSDAGKRMAYDQYGHAGVDQSMGGGAGFGAGGANFSDIFGDVFSDFFGAGRAGARGGPQRGSDLRYTLELNLEEAVRGTTVTIRVPTLV----------------HCKTCDGSGAKKGTTPVTCTTCGGIGQVRMQQGFFSVQQTCPRCHGSGKMI--ADPCPDCHGQGRVEEHKTLSVKVPAGVDSGDRIRLAG 233          
The following BLAST results are available for this feature:
BLAST of CN185798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_FRATU3.000e-2030.17Chaperone protein dnaJ OS=Francisella tularensis G... [more]
DNAJ_FRATH3.000e-2030.17Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_BACA23.000e-2028.02Chaperone protein dnaJ OS=Bacillus amyloliquefacie... [more]
DNAJ_ACISJ3.000e-2030.80Chaperone protein dnaJ OS=Acidovorax sp. (strain J... [more]
YR260_MIMIV3.918e-2029.79DnaJ-like protein R260 OS=Acanthamoeba polyphaga m... [more]
DNAJ_TREDE3.918e-2030.00Chaperone protein dnaJ OS=Treponema denticola GN=d... [more]
DNAJ_STRA13.918e-2029.49Chaperone protein dnaJ OS=Streptococcus agalactiae... [more]
DNAJ_PSEHT3.918e-2028.93Chaperone protein dnaJ OS=Pseudoalteromonas halopl... [more]
DNAJ_BLOFL3.918e-2030.52Chaperone protein dnaJ OS=Blochmannia floridanus G... [more]
DNAJ_AZOVD3.918e-2030.08Chaperone protein dnaJ OS=Azotobacter vinelandii (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185798 ID=CN185798; Name=CN185798; organism=Citrus sinensis; type=EST; length=759bp
GAGGCTACTCTGAAGATCTGAAATTTTTTAGTACAAGAAGATGTTCGGAA
GAGCGCCAAAGAAAAGCGATAACACAAAGTACTATGAGATTCTCGGAGTC
TCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTTATAGGAAAGCCGC
CATCAAAAACCATCCTGACAAGGGCGGTGATCCTGAGAAGTTTAAAGAGT
TGGCACAAGCGTATGAGGTTCTGAGTGACCCAGAGAAGCGTGAAATATAT
GATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGGGTGGTGGTGGTGG
TGCCCATGACCCATTCGACATATTCCAATCCTTCTTCGGTGGCAGCCCAT
TTGGTGGTGGGAGCAGCAGAGGAAGAAGGCAAAGGAGGGGAGAGGACGTA
ATCCATCCCCTCAAGGTTTCGTTGGAGGATCTGTACAATGGGACATCTAA
GAAGCTCTCGCTCTCCCGCAATGTAATCTGCACCAAGTGCAAAGGGAAGG
GGTCTAAGTCAGGTGCATCAATGAAATGTTCTGGCTGCCAGGGATCTGGA
ATGAAAGTTTCAATAAGACACCTTGGCCCCTCTATGATTCAACAAATGCA
GCATCCTTGCAATGAGTGCAAGGGTACTGGAGAAACAATCAATGACAAGG
ATCGCTGCCCACAATGTAAGGGTGAGAAGGTCATTCAGGAGAAAAAAGTC
TTGGAGGTTATTGTTGAGAAGGGGATGCAAAATGGACAGAAGATTACGTT
CCCTGGAGA
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