CN185790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: ATB17_ARATH (Homeobox-leucine zipper protein ATHB-17 OS=Arabidopsis thaliana GN=ATHB-17 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.516e-18 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 382 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGGIADGNSKGPFP 684 +++ A+ L LRPRQ+EVWFQNRRAR+KLKQTE++CE+LK+ +LT+EN RLH P ++ A++LTMCP CER+ + + P P Sbjct: 165 QKEVLAKHLMLRPRQIEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEENHRLH-REVEELRAMKVGPTTVN-SASSLTMCPRCERVTPAASPSRAVVPVP 263 HSP 2 Score: 23.8682 bits (50), Expect = 1.516e-18 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = -3 Query: 665 KQHSTLNPKQKASLGK 712 +Q+ TLNPKQK L K Sbjct: 156 RQNHTLNPKQKEVLAK 171
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX26_ORYSJ (Putative homeobox-leucine zipper protein HOX26 OS=Oryza sativa subsp. japonica GN=HOX26 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13 Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = -1 Query: 433 SKRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAATLTMCPSC 687 +++Q A +L L RQVEVWFQNRRARTKLKQTE DC+ L++ C+ L +N RL P+ + AT +CPSC Sbjct: 142 AEKQELAGKLGLSARQVEVWFQNRRARTKLKQTEADCDLLRRWCDHLAADNARLRRDLAELRRSSSSPPV-SGLAVATPVVCPSC 225
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: ATHBX_ARATH (Homeobox-leucine zipper protein ATHB-X OS=Arabidopsis thaliana GN=ATHB-X PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.584e-12 Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = -1 Query: 424 LNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAAT--LTMCPSCERI 660 L L RQVEVWFQNRRAR+KLK TE++CE+LK+ +L ++NRRL + L P++T LTMCP CER+ Sbjct: 103 LKLSQRQVEVWFQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQ---------IEVEELRALKPSSTSALTMCPRCERV 174 The following BLAST results are available for this feature:
BLAST of CN185790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185790 ID=CN185790; Name=CN185790; organism=Citrus sinensis; type=EST; length=714bpback to top |