DC900033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB1_MOUSE (Voltage-gated potassium channel subunit beta-1 OS=Mus musculus GN=Kcnab1 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.081e-52 Identity = 89/171 (52.05%), Postives = 130/171 (76.02%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ Sbjct: 75 NLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPV 245
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB1_HUMAN (Voltage-gated potassium channel subunit beta-1 OS=Homo sapiens GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.081e-52 Identity = 89/171 (52.05%), Postives = 130/171 (76.02%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ Sbjct: 93 NLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPV 263
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB1_BOVIN (Voltage-gated potassium channel subunit beta-1 OS=Bos taurus GN=KCNAB1 PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.081e-52 Identity = 89/171 (52.05%), Postives = 130/171 (76.02%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG Q+ A+ L+ + GVN FD AEVYA G+AE I+G I++ GW+RS +V++TK++WGG+ ++GLSRKHI+EG K SL+RL ++YVDV++ +RPD++TP+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +++ P+ Sbjct: 75 NLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPV 245
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 5.330e-52 Identity = 91/171 (53.22%), Postives = 126/171 (73.68%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG+Q+ A+ LL +HGVN FD AEVYA G+AE +G ++ GW+RS V++TKIFWGGQ ++GLSRKHI+EG + SL RL ++YVD+++ +R D S+P+EE VRAM YVI++G A YWGTS WSA +I EA+ +A + +L+ P+ Sbjct: 82 NLGKSGLRVSCLGLGTWVTFGSQISDETAEDLLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPPV 252
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB3_XENLA (Voltage-gated potassium channel subunit beta-3 OS=Xenopus laevis GN=kcnab3 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.551e-51 Identity = 89/171 (52.05%), Postives = 129/171 (75.44%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG+Q+ A++L+ +HGVN FD AEVYA GRAE +G+ +++ W+RS VV+TKI+WGGQ ++GLSRKHI+EG + SL+RL +DYVD+++ +R D ++P+EE VRAM +VI++G A YWGTS WSA +I EA+ +A + +L+ P+ Sbjct: 75 NLGKSGLRVSCLGLGTWVTFGSQISDEVAENLMTVAYEHGVNLFDTAEVYAAGRAERTLGKILKKKEWRRSSYVVTTKIYWGGQAETERGLSRKHIIEGLRGSLERLQLDYVDIVFANRMDPNSPMEEIVRAMTFVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPPV 245
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 1.313e-50 Identity = 88/171 (51.46%), Postives = 124/171 (72.51%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 +LG+SGLRVS L G WV+FG+Q+ A+ +L +HGVN FD AEVYA G+AE +G ++ GW+RS V++TKIFWGGQ ++GLSRKHI+EG + SL+RL + YVD+++ +R D + P+EE VRAM YVI++G A YWGTS W A +I EA+ +A + +L+ P+ Sbjct: 82 NLGKSGLRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAAEIMEAYSMARQFNLIPPV 252
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: KCAB_SCHPO (Putative voltage-gated potassium channel subunit beta OS=Schizosaccharomyces pombe GN=SPCC965.06 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.229e-48 Identity = 94/173 (54.34%), Postives = 124/173 (71.68%), Query Frame = 3 Query: 78 LGRSGLRVSQLAYGAWVSFGNQ-LDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGG--QGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGIAERLDLVGPI 587 LGRSGL+VS + G W+++GN+ DV K+ L+ D G+N FD AE+Y+NG +E +MG+AI+ELGW RS+ V++TK+F+G + PN GLSRKHI+EG ASLKRL + YVDVI HRPD S P+EE VRA +I G AFYWGTSEWSA +I A IA + +L+ P+ Sbjct: 18 LGRSGLKVSAFSLGGWLTYGNEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRPDPSVPMEEVVRAFTQLIQDGKAFYWGTSEWSAFEIEHAHHIATKYNLIAPV 190
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: YAJO_ECOLI (Uncharacterized oxidoreductase yajO OS=Escherichia coli (strain K12) GN=yajO PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 7.254e-25 Identity = 67/165 (40.61%), Postives = 100/165 (60.61%), Query Frame = 3 Query: 78 LGRSGLRVSQLAYGAWVSFGNQ--------LDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEA 548 LG++ LRVS+L G ++FG L ++ +++ + G+NFFD A Y++G +EEI+G+A+R+ +R D+VV+TK+F G +GLSR I+ SL+RL MDYVD++ HR D +TPIEET+ A+N V+ G A Y G S A Q +A Sbjct: 6 LGKTDLRVSRLCLGC-MTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFA-RREDVVVATKVFHR-VGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQA 167
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: YGHZ_ECOLI (Uncharacterized protein yghZ OS=Escherichia coli (strain K12) GN=yghZ PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.853e-21 Identity = 57/158 (36.08%), Postives = 91/158 (57.59%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYAN--GRAEEIMGQAIRE-LGWKRSDIVVSTKIFWG-GQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQ 536 + G+SGLR+ L+ G W +FG+ + +++L+ D G+ FD A Y G AEE G+ +RE R ++++STK + GP G SRK+++ SLKR+ ++YVD+ Y HR D +TP+EET A+ + + G A Y G S +S ++ Sbjct: 17 YCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPER 174
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: YGHZ_ECO57 (Uncharacterized protein yghZ OS=Escherichia coli O157:H7 GN=yghZ PE=4 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.853e-21 Identity = 57/158 (36.08%), Postives = 91/158 (57.59%), Query Frame = 3 Query: 75 HLGRSGLRVSQLAYGAWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYAN--GRAEEIMGQAIRE-LGWKRSDIVVSTKIFWG-GQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQ 536 + G+SGLR+ L+ G W +FG+ + +++L+ D G+ FD A Y G AEE G+ +RE R ++++STK + GP G SRK+++ SLKR+ ++YVD+ Y HR D +TP+EET A+ + + G A Y G S +S ++ Sbjct: 17 YCGKSGLRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPER 174 The following BLAST results are available for this feature:
BLAST of DC900033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC900033 ID=DC900033; Name=DC900033; organism=Citrus sinensis; type=EST; length=587bpback to top |