DC900033

Overview
NameDC900033
Unique NameDC900033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.043e-12
Identity = 54/171 (31.58%), Postives = 82/171 (47.95%), Query Frame = 3
Query:   78 LGRSGLRVSQLAYGAW---VSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHIVEGT--------KASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEAWGI 557
            LG  GL VS    G       +G      +   L+    + G+   D ++VY     E ++G+A++  G  R  +V++TK  +G    ++K    K  V G         +ASLKRLD+D +D+ Y HR DT  PIE TV  +  ++++G   Y G SE SA  I  A  +
Sbjct:   13 LGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALK--GGTRERVVLATK--FGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAV 179          
BLAST of DC900033 vs. ExPASy Swiss-Prot
Match: AAD14_YEAST (Putative aryl-alcohol dehydrogenase AAD14 OS=Saccharomyces cerevisiae GN=AAD14 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.495e-11
Identity = 49/170 (28.82%), Postives = 83/170 (48.82%), Query Frame = 3
Query:   87 SGLRVSQLAYG------AWVSFGNQLDVXEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQ--AIRELGWKRSDIVVSTKI--------FWGGQGPNDKGLSRKHIVEGTKASLKRLDMDYVDVIYCHRPDTSTPIEETVRAMNYVIDKGWAFYWGTSEWSAQQITEA 548
            +G+RVS L  G      AW  F   ++  +A  LL    + G N  D A  Y N  +E  +G+  A R+L   R  IV++TK           GG+  N  G  ++ +    + SL++L  D++D++Y H  D  + IEE + +++ ++ +G   Y G S+  A  ++ A
Sbjct:   25 AGIRVSPLILGGASIGDAWSGFMGSMNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMASRKL---RDQIVIATKFTGDYKKYEVGGGKSANYCGNHKRSLHVSVRDSLRKLQTDWIDILYIHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAA 191          
The following BLAST results are available for this feature:
BLAST of DC900033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
A115_TOBAC7.043e-1231.58Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
AAD14_YEAST3.495e-1128.82Putative aryl-alcohol dehydrogenase AAD14 OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionDC900033 VSS Citrus sinensis cDNA clone VS27Q42 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900033 ID=DC900033; Name=DC900033; organism=Citrus sinensis; type=EST; length=587bp
GTACACTTCCCCAACAGGCCAAAAAAACAGACAACAAAAAGGTTAAAAAA
GGAAATTACAAAATGCAATACAAGCACCTGGGGAGATCGGGGCTGAGAGT
GAGCCAGCTCGCGTACGGAGCGTGGGTCAGCTTCGGGAACCAGCTGGACG
TGANNGAGGCGAAGTCGCTCTTGCAATGCTGCCGCGACCACGGCGTCAAC
TTCTTCGACAATGCCGAGGTCTACGCCAACGGCCGCGCGGAAGAGATCAT
GGGCCAGGCCATTCGCGAGCTCGGGTGGAAGCGATCCGACATCGTCGTTT
CCACCAAGATCTTTTGGGGCGGCCAGGGCCCCAACGATAAAGGCCTCTCC
AGAAAACACATTGTCGAGGGCACCAAAGCTTCCTTGAAACGCCTCGACAT
GGATTACGTCGACGTTATTTATTGTCACAGGCCGGACACGTCGACACCGA
TAGAGGAGACGGTGAGGGCGATGAATTATGTGATTGATAAGGGGTGGGCG
TTTTACTGGGGAACAAGTGAGTGGTCGGCGCAGCAGATCACCGAGGCTTG
GGGGATTGCTGAGCGCTTGGATTTGGTGGGCCCCATT
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