CN185789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_ASHGO (COP9 signalosome complex subunit 5 OS=Ashbya gossypii GN=RRI1 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.046e-41 Identity = 77/135 (57.04%), Postives = 102/135 (75.56%), Query Frame = 1 Query: 319 ISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPE 723 +SALA +K++ HA GG +EV+G++ G + I+V+D++ LPVEGTETRVNAQ ++YEY V Y +T G VGWYHSHPGYGCWLSGID TQ LNQ FQ+P+LA+V+DP R+ ++G ++IGAFRT PE Sbjct: 75 LSALACMKILRHAFDGGDMEVLGMLLGYVQDEMIVVVDSYRLPVEGTETRVNAQMESYEYTVQYLETAVPEGLA--IVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDPKRSKASGVIDIGAFRTMPE 207 HSP 2 Score: 21.9422 bits (45), Expect = 4.046e-41 Identity = 10/23 (43.48%), Postives = 14/23 (60.87%), Query Frame = 3 Query: 255 AQTKFQQEKPWVNDPHYFKREDL 323 +Q + QQE W DP YF++ L Sbjct: 54 SQVRVQQEL-WKQDPTYFQKAAL 75
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_KLULA (COP9 signalosome complex subunit 5 OS=Kluyveromyces lactis GN=RRI1 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.286e-39 Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = 1 Query: 319 ISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYP 720 IS LA KM+ HA GG IEVMG++ G T D I+V D ++LPV+GTETRVNA ++YEYMV Y + + + VGWYHSHPGYGCWLS ID+ TQ LNQ +Q+P+LA+V+DP +++S ++IGAFRT P Sbjct: 68 ISRLATTKMLSHAVDGGDIEVMGMLVGYTSNDMIVVKDCYSLPVQGTETRVNAHMESYEYMVQY--LDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPKKSLSGNTLDIGAFRTLP 199
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_CANGA (COP9 signalosome complex subunit 5 OS=Candida glabrata GN=RRI1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.331e-36 Identity = 73/143 (51.05%), Postives = 97/143 (67.83%), Query Frame = 1 Query: 310 SVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY--SQTNKQAGRLE---NAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPE 723 +V +S LA K++ HA GG IEVMG++ G G+ ++ D F LPVEGTET VNA ++YEYMV + + R E N +GWYHSHPGY CWLS ID+ TQ LNQQ Q+P+LA+V+DP ++ + KV IG+FRTY + Sbjct: 73 NVLLSKLACSKILCHATKGGNIEVMGMLLGNVIGNTFVIFDCFELPVEGTETMVNAHMESYEYMVQFYHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDPHKSKNDQKVRIGSFRTYQD 215
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_YEAST (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae GN=RRI1 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 6.181e-34 Identity = 72/144 (50.00%), Postives = 94/144 (65.28%), Query Frame = 1 Query: 313 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY----------SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 714 V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y G N VGW+HSHPGY CWLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT Sbjct: 71 VLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_YEAS7 (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain YJM789) GN=RRI1 PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 6.181e-34 Identity = 72/144 (50.00%), Postives = 94/144 (65.28%), Query Frame = 1 Query: 313 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY----------SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 714 V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y G N VGW+HSHPGY CWLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT Sbjct: 71 VLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_YEAS1 (COP9 signalosome complex subunit 5 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RRI1 PE=3 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 6.181e-34 Identity = 72/144 (50.00%), Postives = 94/144 (65.28%), Query Frame = 1 Query: 313 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDY----------SQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 714 V IS L+ K+ +A GG IE+MG++ G T D I+VMD F LPV GTETRVNAQ ++YEYMV Y G N VGW+HSHPGY CWLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT Sbjct: 71 VLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDCFNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRT 214
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: PSDE_DICDI (26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28 Identity = 71/140 (50.71%), Postives = 92/140 (65.71%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGKT-DGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 714 T ++ IS+LALLKM+ HAR+G +EVMGLM G+ D I V+D FA+P GT V A ++ M+D KQ GR E +GWYHSHPG+GCWLS +DV+TQ +Q Q +AVV+DP ++V GKV I AFRT Sbjct: 27 TAETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIRVIDVFAMPQSGTSVSVEAIDPVFQTKMLDML---KQTGRDEIVIGWYHSHPGFGCWLSSVDVNTQQSFEQLQSRAVAVVVDPLQSV-RGKVVIDAFRT 162
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28 Identity = 72/152 (47.37%), Postives = 96/152 (63.16%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTY-PEGYKPPDEP 747 T+ +V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + + +AVV+DP ++V GKV I AFRT P+ EP Sbjct: 29 TSETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVK-GKVVIDAFRTINPQSMALNQEP 176
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: YPT5_CAEEL (Uncharacterized protein F37A4.5 OS=Caenorhabditis elegans GN=F37A4.5 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 68/139 (48.92%), Postives = 87/139 (62.59%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 714 T+ +V IS+LALLKM+ HARSG +EVMGLM G D I V D FA+P GT V + Y+ + K GR EN VGWYHSHPG+GCWLS +DV+TQ + +AVV+DP ++V GKV + AFR+ Sbjct: 25 TSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVDPVYQ--TKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVK-GKVMLDAFRS 160
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27 Identity = 69/139 (49.64%), Postives = 89/139 (64.03%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 711 T V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+DP ++V GKV I AFR Sbjct: 27 TAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-GKVVIDAFR 161 The following BLAST results are available for this feature:
BLAST of CN185789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185789 ID=CN185789; Name=CN185789; organism=Citrus sinensis; type=EST; length=753bpback to top |