DC900030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2C_HUMAN (Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22 Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRA 442 KR+ +EL L SA P +D++F W TI G + + + + +S+ FP YP+ P V F T +HPN+++ G+ICLDILKE+WS + +LLSI SLL +PN D PL A ++K A Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.161e-22 Identity = 55/148 (37.16%), Postives = 83/148 (56.08%), Query Frame = 2 Query: 47 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 MAS +E+ D+ K + V DD+ + T GP+DS + GGV+ + + P YP+K P V F K++HPN++ S+G++CLD++ + WSP + V S + LL PNP DP E A + DRA YE + + +KYA Sbjct: 1 MASPSKRREM-DMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEKYA 147
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC9_CAEEL (SUMO-conjugating enzyme UBC9 OS=Caenorhabditis elegans GN=ubc-9 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22 Identity = 54/155 (34.84%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 41 SQMASKRINKELKDLQKDPPASCSAGPVAD-----DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 S +A+ R+ +E K +KD P A PV + ++F+W+ I G D+ + GG++ + + F D+P PPK F +FHPN+ +G++CL +L E W P+++I ++L+ I LL PN +DP E +Y +RA+YE + KYA Sbjct: 2 SGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYA 156
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC84_DROME (Ubiquitin-conjugating enzyme E2-18 kDa OS=Drosophila melanogaster GN=Ubc84D PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22 Identity = 46/146 (31.51%), Postives = 85/146 (58.22%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 A++R+ +EL DL + ++ +D+ ++ P +P+ G F + I+FPP YPF PPK+ F+TK++HPN++ G +CL I+ + W P +VL ++ +++ +P P+ PL ++A + + K+ TA +T+K A Sbjct: 3 ATRRLTRELSDLVEAKMSTLRNIESSDESLLMWTGLLVPEKAPYNKGAFRIEINFPPQYPFMPPKILFKTKIYHPNVDEKGEVCLPIISTDNWKPTTRTEQVLQALVAIVHNPEPEHPLRSDLAEEFVREHKKFMKTAEEFTKKNA 148
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPS (Ubiquitin-conjugating enzyme E2 S OS=Drosophila pseudoobscura pseudoobscura GN=GA22810 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22 Identity = 56/158 (35.44%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 11 NSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 +SQ + S +++ +EL++++ PP D+ QA I GP+ +P+A G+F V + D+P PPK F TK+FHPN+ NG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A Sbjct: 2 SSQYSNVENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2S_DROPE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila persimilis GN=GL16001 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22 Identity = 56/158 (35.44%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 11 NSQAPKLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 +SQ + S +++ +EL++++ PP D+ QA I GP+ +P+A G+F V + D+P PPK F TK+FHPN+ NG IC++ LK+ W P L I +LL+I LL PNP+ L E M Y AR T+ +A Sbjct: 2 SSQYSNVENLSPQTIRQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAGNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2S_BRAFL (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae GN=BRAFLDRAFT_259979 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22 Identity = 53/143 (37.06%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 +++ KE+ DL PP P D+ QATI GP +P+ GG F + + D+P PPK F TK+FHPN+ NG IC++ LK+ W L + +LL+I LL PNP+ L E + Y AR T+ +A Sbjct: 16 RQVAKEVLDLANHPPEGVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLSLGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHILLTIKCLLIYPNPESALNEEAGKLLLEQYDNYSERARMMTEIHA 158
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22 Identity = 54/155 (34.84%), Postives = 88/155 (56.77%), Query Frame = 2 Query: 41 SQMASKRINKELKDLQKDPPASCSAGPV--AD---DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 484 S + +R+ +E K +KD P A PV AD D+ W+A I G + +AGGV+ +++ +P +YP KPPKV F +HPN+ +G+ICL IL E W PA+T+ +++L + LL PNP+ P + ++A+Y+ ++Y+ Sbjct: 2 SSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYS 156
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2C_MACFA (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 51/129 (39.53%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRA 442 KR+ +EL L SA P +D++F W TI G + + + + +S+ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K A Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.814e-22 Identity = 51/129 (39.53%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRA 442 KR+ +EL L SA P +D++F W TI G + + + + +S+ FP YP+ P V F T +HPN+++ G+ICLDILK++WS + +LLSI SLL +PN D PL A ++K A Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTA 161 The following BLAST results are available for this feature:
BLAST of DC900030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900030 ID=DC900030; Name=DC900030; organism=Citrus sinensis; type=EST; length=703bpback to top |