DC900030
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC6_YEAST (Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae GN=UBC6 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 41/134 (30.60%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 41 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKT 433 ++ A KR+ KE K + ++PP A P D++ W I GP+D+P+ GG + ++ FP DYP+KPP + T + N +CL D + W+P ++S +L + S +T + H KT Sbjct: 3 TKQAHKRLTKEYKLMVENPPPYILARPNEDNILEWHYIITGPADTPYKGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKPNTRLCLSMSDYHPDTWNPGWSVSTILNGLLSFMTSDEATTGSITTSDHQKKT 134
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin carrier protein E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNP 391 KR+ KE + L K+P + A P +D+ W + G +PFAGG + I FPP+YP+KPP + T + + ICL D E W+P ++S +L + S + D +P Sbjct: 8 KRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYPYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSP 120
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC12_KLULA (NEDD8-conjugating enzyme UBC12 OS=Kluyveromyces lactis GN=UBC12 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 33/96 (34.38%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 164 PSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 451 P +AGG + ++ YP +PP V +++HPNI+ +G++CL++L+E W+PAL I +++ I L +PN DPL + A D ++E Sbjct: 67 PDIGYYAGGTYYFNVFIKDTYPMEPPVVKCMHRIYHPNIDIDGNVCLNLLREDWTPALDIQSIIIGILFLFHEPNGRDPLNKDAAKTLIEDPLRFE 162
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 2 Query: 56 KRINKELKDLQKDPPASCSAGP--VADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVF--HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 379 KR+ KEL LQ DPP + V + + W + G + + G F + F YPF P+V F + HP++ SNG ICL IL E WSPAL++ V LSI S+L+ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBCX_PICPA (Ubiquitin-conjugating enzyme E2-24 kDa OS=Pichia pastoris GN=PEX4 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.075e-13 Identity = 55/194 (28.35%), Postives = 87/194 (44.85%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAG-----------PVADDMFH-WQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRT----------------------------------KVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-TDRAKYETTARSWTQKYAM 487 A KR+ +E + + K+ SA PV++D F+ W A + GP+D+ + + + I P +YP +PPK F ++ HPNI N G ICLDIL+ +W+PA T+S L +I LL DP P PL ++A++ K D Y + + +Y++ Sbjct: 3 AEKRLLQEYRSILKEQRQKGSASTLSSNGILDLKPVSEDNFYKWTAKLKGPTDTGYQDAFWELQIDIPSNYPTQPPKFTFIVSDDIPRNRRQRQTNQIQDDDEFEGAEKEVLRHCYRMPHPNIAFNTGEICLDILQAKWTPAWTLSSALTAIVLLLNDPEPLSPLDIDMANLMKINDLKAYNSLIEYYVGRYSI 196
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC6_ASHGO (Ubiquitin-conjugating enzyme E2 6 OS=Ashbya gossypii GN=UBC6 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.127e-13 Identity = 43/145 (29.66%), Postives = 71/145 (48.97%), Query Frame = 2 Query: 41 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARS 466 S+ A KR++KE K + ++PP A P D++ W I GP ++P+ G + ++ FP DYPF PP + T + N +CL D + W+P+ +++ +L + S +T I M TD K + A+S Sbjct: 3 SRQAYKRLSKEYKMMTENPPPYIVAAPKEDNILVWHYVITGPPETPYEDGQYHGTLVFPNDYPFNPPAIRMLTP--NGRFRENTRLCLSMSDYHPDTWNPSWSVATILTGLLSFMTTDE------SSIGTMESTDSTKRKYAAKS 139
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 38/116 (32.76%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 41 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 379 S A+KR+ KE K++ +PP A P D++ W I GP +P+ G + ++ FP DYPF PP + T + N +CL D E W+PA ++ +L + S +T Sbjct: 3 SIQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UBC6_CANGA (Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata GN=UBC6 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 36/116 (31.03%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 41 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 379 ++ A KR+ KE K + ++PP A P +++ W I GP D+P+ GG + ++ FP DYP+KPP + T + N +CL D + W+P +++ +L + S +T Sbjct: 3 TKQAQKRLTKEYKMMVENPPPFIIARPNEENILEWHYVISGPPDTPYDGGQYHGTLTFPSDYPYKPPAIRMITP--NGRFKENTRLCLSMSDYHPDTWNPGWSVATILNGLLSFMT 116
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2J1_MOUSE (Ubiquitin-conjugating enzyme E2 J1 OS=Mus musculus GN=Ube2j1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 376 A KR+ KE +L KDP A P+ D++F W T+ GP DS F GGV+ I PP+YP KPP + T + ICL I E W P+ +I LL+I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119
BLAST of DC900030 vs. ExPASy Swiss-Prot
Match: UB2J1_HUMAN (Ubiquitin-conjugating enzyme E2 J1 OS=Homo sapiens GN=UBE2J1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 43/112 (38.39%), Postives = 57/112 (50.89%), Query Frame = 2 Query: 50 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL---KEQWSPALTISKVLLSICSLL 376 A KR+ KE +L KDP A P+ D++F W T+ GP DS F GGV+ I PP+YP KPP + T + ICL I E W P+ +I LL+I + Sbjct: 11 AVKRLMKEAAEL-KDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTA--NGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFM 119 The following BLAST results are available for this feature:
BLAST of DC900030 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900030 ID=DC900030; Name=DC900030; organism=Citrus sinensis; type=EST; length=703bpback to top |