CN185784

Overview
NameCN185784
Unique NameCN185784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:827..1531. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.647e-38
Identity = 72/131 (54.96%), Postives = 92/131 (70.23%), Query Frame = -3
Query:  301 EEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 693
            E++YP  GK+  C+F+ +     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG  WG++GYF +E GKNMCG+A CASYP+
Sbjct:  200 EDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPI 330          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29
Identity = 61/137 (44.53%), Postives = 88/137 (64.23%), Query Frame = -3
Query:  295 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVVA 702
            L++E +YP    EG C+++ +    +V     +  G+E EL++ VG  RP +VA +V   F  Y+SG+Y S  C  +P+ VNHAV+AVGYG + G  YW++KNSWG  WG+ GY +M   + NMCGIA+ AS P+VA
Sbjct:  189 LETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVESDFMMYRSGIYQSQTC--SPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCGIASLASLPMVA 323          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29
Identity = 64/137 (46.72%), Postives = 84/137 (61.31%), Query Frame = -3
Query:  298 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 702
            +D+E AYP   ++G C+F S +V        NI  G+E  LQ AV  + P+SV  +     F+FY SGVY    C  +P  ++HAV+AVGYG E G  +WL+KNSW  +WGD GY KM   + N CGIAT ASYP+V
Sbjct:  189 IDTEAAYPYEARDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSC--SPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = -3
Query:  298 LDSEEAYPSPGKEGV-CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 702
            +DSEE+YP   K+   C++ +E         V+I  G E  L  AV  V PVSVA +     F+FY+SG+Y    C +   D++H V+ VGYG E G  YW++KNSWGE WGD GY  M    KN CGIAT ASYP+V
Sbjct:   83 IDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSE--DLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASYPLV 218          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.495e-26
Identity = 66/141 (46.81%), Postives = 84/141 (59.57%), Query Frame = -3
Query:  298 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYPVV 702
            L +EE+YP  G    C++ +EN    V D V I  G E+ L  AV  V P+SVA +   D F+FY SG+Y   +C    + +NHAV+ VGYG E    DG  YWL+KNSWGE WG  GY K+     N CGIAT A+YP+V
Sbjct:  196 LATEESYPYIGPGRKCRYHAENSAANVRDFVQIP-GREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKR--VHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLATYPIV 333          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26
Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = -3
Query:  304 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 702
            +DSE+AYP  G+E  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  195 IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26
Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = -3
Query:  304 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 702
            +DSE+AYP  G+E  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  195 IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.177e-26
Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = -3
Query:  304 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 702
            +DSE+AYP  G+E  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  195 IDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25
Identity = 58/138 (42.03%), Postives = 83/138 (60.14%), Query Frame = -3
Query:  298 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 702
            +D+E++YP  G +  C F+   +G      V+I  G E++++ AV  + PVSVA +   + F+ Y  GVY+  +C    +D  H V+ VGYG  E G+ YWL+KNSWG  WG+ GY KM   + N CGIAT +SYP V
Sbjct:  204 IDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLD--HGVLVVGYGTDESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIATASSYPTV 339          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.224e-25
Identity = 65/139 (46.76%), Postives = 82/139 (58.99%), Query Frame = -3
Query:  304 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG----VEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYP 702
            L++E  YP  GK+G C++ SEN    + D VN+    E  L  AV  + PVS A +   D FRFY  G+Y    C +    VNHAV+ VGYG    V+DG  YWLIKNSWGE WG +GY ++     N CGIA+ ASYP
Sbjct:  196 LEAEATYPYEGKDGPCRYRSENASANITDYVNLPPN-ELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSS--YFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKDHNNHCGIASLASYP 331          
The following BLAST results are available for this feature:
BLAST of CN185784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
CATH_MOUSE1.647e-3854.96Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CATLL_FASHE3.113e-2944.53Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CYSP2_HOMAM5.310e-2946.72Digestive cysteine proteinase 2 OS=Homarus america... [more]
CATL1_CHICK2.467e-2646.38Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
TEST2_MOUSE5.495e-2646.81Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATK_MACMU7.177e-2645.19Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA7.177e-2645.19Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN7.177e-2645.19Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATL_SARPE1.224e-2542.03Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATJ_MOUSE1.224e-2546.76Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185784 ID=CN185784; Name=CN185784; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTAAGCTTCCATATAACAACTACCTTGCATTGCCAT
TTATATATAACATCGGTGGTGTCCTAGTCACAATGACTGTTTACATGGAC
ATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTG
TAGATTATATGGACATTAATCTCCGAATTTATTTTGTACATAAAGCCAAG
CATTCTGCTATCATGCTTGAGTGAAATAATATAAGTTTTATGAGCAAATG
ACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCAC
AACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCT
CCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTA
ATCAGCCAATATGGAACGCCGTCTTCAACTCCGTACCCAACAGCAACGAC
AGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAA
CTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTC
ACAGGTCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAA
GGTAATGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGA
ATTTGCAGACACCCTCTTTTCCGGGGGAGGGATATGCTTCCTCAGAATCA
AGGC
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