CN185784

Overview
NameCN185784
Unique NameCN185784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16
Identity = 44/147 (29.93%), Postives = 75/147 (51.02%), Query Frame = -3
Query:  271 SEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPVVA*SAPEEIV 696
            +EE YP    +G C  +S      +     +    E  + +AV   +P++   +  + F++Y  GV+S   CG +   +NHA+  +GYG +  G  YW+++NSWG +WG+ GY +M  G      +CGIA    +P +   A  E++
Sbjct:  204 TEENYPYLAYQGTCNANSFPNSAYITGYSYVRRNDERSMMYAVSN-QPIAALIDASENFQYYNGGVFSGP-CGTS---LNHAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSSSGVCGIAMAPLFPTLQSGANAEVI 345          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 48/135 (35.56%), Postives = 73/135 (54.07%), Query Frame = -3
Query:  298 EEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV-EDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVV 693
            E+ YP   K   C   ++ V V +  SVN+T   +DE + A  L     +SV    +   +FY+ G+        +   ++HAV+ VGYGV E   P+W++KNSWG  WG++GYF+M  G   CGI T A+  ++
Sbjct:  188 EDNYPYDAKNEKCHLKTDGVAVYINSSVNLT---QDETELAAWLYHNSTISVGMNALL-LQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKNEPFWIVKNSWGVEWGENGYFRMYRGDGSCGINTVATSAMI 318          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 50/139 (35.97%), Postives = 73/139 (52.52%), Query Frame = -3
Query:  313 LDSEEAYPSPGKEGVCKFSSENVGVQVLDS--VNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 702
            L  E  +P  G +  CK   +       +   V    G  +E    + LV   P++VAFEV D F  YK G+Y  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG  WG++GYF++  G + C I + A
Sbjct:  316 LVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIA 454          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.793e-16
Identity = 49/142 (34.51%), Postives = 74/142 (52.11%), Query Frame = -3
Query:  310 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGF-RFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-------YWLIKNSWGENWGDHGYFKMEMG---KNMCGIATCAS 702
            L+SE+ YP  G +G CKF    +   V    N ++ + DE Q +  L++   +A  +   + + Y  GV     CG     ++H V+ VGYG     P       YW+IKNSWGENWG++GY+K+  G   +N CG+ +  S
Sbjct:  226 LESEKDYPYTGSDGKCKFDKSKIVASVQ---NFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGR---HLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVS 361          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 50/139 (35.97%), Postives = 72/139 (51.80%), Query Frame = -3
Query:  313 LDSEEAYPSPGKEGVCKFSSENVGVQVLDS--VNITLGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 702
            L  E  +P  G +  CK   +       +   V    G  +E    + LV   P++VAFEV D F  YK G+Y  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG  WG+ GYF++  G + C I + A
Sbjct:  316 LVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGEDGYFRIRRGTDECAIESIA 454          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.148e-15
Identity = 39/86 (45.35%), Postives = 57/86 (66.28%), Query Frame = -3
Query:  313 PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 555
            P++VAFEV D F  Y+ GVY  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG +WG++GYF++  G + C I + A
Sbjct:  369 PMAVAFEVYDDFLHYRKGVYHHTGLRDPFNPFELTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRGTDECAIESIA 454          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = -3
Query:  325 PVSVAFEVVDGFRFYKSGVYSSTKCGN-----TPMDV-NHAVVAVGYGVE--DGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 555
            P  V FEV + F+FYK G+Y  T          P ++ NHAV+ VGYGV+   G PYW +KNSWG  WG+ GYF++  G + CG+
Sbjct:  359 PFPVGFEVYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRGTDECGV 443          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.558e-15
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = -3
Query:  313 PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 555
            P++VAFEV D F  Y++G+Y  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG +WG+ GYF++  G + C I + A
Sbjct:  369 PLAVAFEVYDDFLHYQNGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTSWGEDGYFRIRRGTDECAIESIA 454          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.341e-15
Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = -3
Query:  325 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 702
            ++ E  Y    +   C          V +     +  E+ L+  +  V P+++A + VD   +Y  G+ S   C N  +  NHAV+ VGYGVE+ VPYW+IKNSWG ++G+ GY ++  G N CG+
Sbjct:  206 VEQEFDYSYKAERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDLTDYY-GGIVSF--CENNGL--NHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGM 326          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.364e-15
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = -3
Query:  313 PVSVAFEVVDGFRFYKSGVYSSTKCGN--TPMDV-NHAVVAVGYGVED--GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCA 555
            P++VAFEV D F  Y SG+Y  T   +   P ++ NHAV+ VGYG +   G+ YW++KNSWG  WG+ GYF++  G + C I + A
Sbjct:  368 PMAVAFEVHDDFLHYHSGIYHHTGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRGTDECAIESIA 453          
The following BLAST results are available for this feature:
BLAST of CN185784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
BROM1_ANACO5.155e-1629.93Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATL_SCHMA6.733e-1635.56Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
CATC_HUMAN6.733e-1635.97Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CYSP1_MAIZE8.793e-1634.51Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CATC_PONAB1.148e-1535.97Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATC_BOVIN1.148e-1545.35Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
CATC_SCHMA1.959e-1545.88Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
CATC_MACFA2.558e-1544.19Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
CATV_NPVSE3.341e-1534.13Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATC_RAT4.364e-1545.35Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185784 ID=CN185784; Name=CN185784; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTAAGCTTCCATATAACAACTACCTTGCATTGCCAT
TTATATATAACATCGGTGGTGTCCTAGTCACAATGACTGTTTACATGGAC
ATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTG
TAGATTATATGGACATTAATCTCCGAATTTATTTTGTACATAAAGCCAAG
CATTCTGCTATCATGCTTGAGTGAAATAATATAAGTTTTATGAGCAAATG
ACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCAC
AACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCT
CCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTA
ATCAGCCAATATGGAACGCCGTCTTCAACTCCGTACCCAACAGCAACGAC
AGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAA
CTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTC
ACAGGTCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAA
GGTAATGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGA
ATTTGCAGACACCCTCTTTTCCGGGGGAGGGATATGCTTCCTCAGAATCA
AGGC
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