CN185784

Overview
NameCN185784
Unique NameCN185784
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21
Identity = 59/140 (42.14%), Postives = 83/140 (59.29%), Query Frame = -3
Query:  301 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 702
            L++E+ YP  G  G C    +N  V  +D   ++    E  L+ AV   +PVSVA +     F+ Y+SG+++  KCG    +++HAVVAVGYG E+GV YW+++NSWG  WG+ GY +ME         CGIA  ASYPV
Sbjct:  181 LNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSY-QPVSVAIDAGGRAFQHYQSGIFTG-KCGT---NMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPV 315          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21
Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = -3
Query:  301 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 702
            ++SEE YP  G++G+C  S+ N  V  +DS  N+    E  LQ AV   +PVSV  +     F+ Y+SG+++    G+  +  NHA+  VGYG E+   +W++KNSWG+NWG+ GY + E         CGI   ASYPV
Sbjct:   83 INSEETYPYRGQDGICN-STVNAPVVSIDSYENVPSHNEQSLQKAVAN-QPVSVTMDAAGRDFQLYRSGIFT----GSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 216          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21
Identity = 55/139 (39.57%), Postives = 78/139 (56.12%), Query Frame = -3
Query:  301 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 702
            +++EE YP   ++G C    +N     +D+  N+    E  LQ AV   +PVSVA +   D F+ Y SG+++   CG     ++HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  209 INTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKHYSSGIFTGP-CGTA---IDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20
Identity = 54/137 (39.42%), Postives = 74/137 (54.01%), Query Frame = -3
Query:  298 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 702
            +DS+ +YP    +  C++ S+           +  G ED L+ AV    PVSV  +     F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+G+ GY +M   K N CGIA+  SYP +
Sbjct:  198 IDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC---TQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 331          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20
Identity = 56/139 (40.29%), Postives = 78/139 (56.12%), Query Frame = -3
Query:  301 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 702
            +++EE YP   ++G C    +N     +D+  N+    E  LQ AV   +PVSVA +   D F+ Y SG+++   CG     V+HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  209 INTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKQYSSGIFTGP-CGTA---VDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20
Identity = 58/141 (41.13%), Postives = 76/141 (53.90%), Query Frame = -3
Query:  298 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV----EDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 702
            L+SE  YP   K+G C++S EN    +     +    ED L +AV  + P+SVA +     F FYK G+Y    C +    V H+++ VGYG      DG  YWL+KNS G  WG+ GY K+   K N CGIAT A YP V
Sbjct:  196 LESEATYPYEEKDGSCRYSPENSTANITGFEFVPKN-EDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCV--VTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGIATYALYPRV 333          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20
Identity = 59/142 (41.55%), Postives = 79/142 (55.63%), Query Frame = -3
Query:  298 LDSEEAYPSPGKE-GVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 702
            LD+EE+YP  G+E   C +  E         V+I    E  L  AV  V P+SVA +     F+FYKSG+Y    C +   D++H V+ VGYG E    +   +W++KNSWG  WG +GY KM   + N CGI+T ASYP V
Sbjct:  196 LDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQ-REKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSK--DLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20
Identity = 55/141 (39.01%), Postives = 77/141 (54.61%), Query Frame = -3
Query:  301 LDSEEAYPSPGKEGVCKFSSEN-VGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE-DGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 702
            + +E  YP   +EG C  S  N + V +    N+    ED L  AV   +PVSVA +     F+FY  GV++    G+   D+NH V  VGYG   DG  YW+++NSWG  WG+HGY +M+      + +CGIA   SYP+
Sbjct:  209 ITTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVAN-QPVSVAIDAGGSDFQFYSEGVFT----GDCSTDLNHGVAIVGYGTTVDGTNYWIVRNSWGPEWGEHGYIRMQRNISKKEGLCGIAMLPSYPI 344          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 53/133 (39.85%), Postives = 72/133 (54.14%), Query Frame = -3
Query:  304 EEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAV--GLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYP 693
            E  YP  G +  CK + ++   ++     +    E EL+ A+  GLV    V+ +     F+ YKSG Y+ TKC N    +NH V AVGYGV DG   W+++NSWG  WGD GY  M +  N CG+AT   YP
Sbjct:  181 ESDYPYTGSDSTCKTNVKSFA-KITGYTKVPRNNEAELKAALSQGLV---DVSIDASSAKFQLYKSGAYTDTKCKNNYFALNHEVCAVGYGVVDGKECWIVRNSWGTGWGDKGYINMVIEGNTCGVATDPLYP 309          
BLAST of CN185784 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.506e-20
Identity = 53/137 (38.69%), Postives = 72/137 (52.55%), Query Frame = -3
Query:  298 LDSEEAYPSPGKEGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 702
            +DSE +YP    +  C++ S+           +  G ED L+ AV    PV V  +     F  Y+SGVY    C      VNH V+ +GYG  +G  YWL+KNSWG N+G+ GY +M   K N CGIA+  SYP +
Sbjct:  197 IDSEASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPAC---TQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGIASYPSYPEI 330          
The following BLAST results are available for this feature:
BLAST of CN185784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
CYSP4_BRANA5.322e-2142.14Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CPGP2_ZINOF6.951e-2140.00Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
ACTN_ACTDE9.078e-2139.57Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
CATS_HUMAN1.186e-2039.42Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
ACTN_ACTCH1.549e-2040.29Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATM_MOUSE2.641e-2041.13Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATL1_PIG2.641e-2041.55Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CYSEP_PHAVU3.450e-2039.01Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CPP2_ENTHI4.506e-2039.85Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
CATS_SAIBB4.506e-2038.69Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185784 ID=CN185784; Name=CN185784; organism=Citrus sinensis; type=EST; length=704bp
TTTTTTTTTTTTTTTTAAGCTTCCATATAACAACTACCTTGCATTGCCAT
TTATATATAACATCGGTGGTGTCCTAGTCACAATGACTGTTTACATGGAC
ATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTATTG
TAGATTATATGGACATTAATCTCCGAATTTATTTTGTACATAAAGCCAAG
CATTCTGCTATCATGCTTGAGTGAAATAATATAAGTTTTATGAGCAAATG
ACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCCAC
AACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCATCT
CCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCTTA
ATCAGCCAATATGGAACGCCGTCTTCAACTCCGTACCCAACAGCAACGAC
AGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTAAA
CTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACACTC
ACAGGTCGAACAAGACCAACTGCATGCTGTAATTCATCTTCAGCACCCAA
GGTAATGTTGACTGAGTCCAGGACTTGGACGCCAACATTTTCAGATGAGA
ATTTGCAGACACCCTCTTTTCCGGGGGAGGGATATGCTTCCTCAGAATCA
AGGC
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